| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2716 |
|---|
| Symbol | |
|---|
| ID | 4258435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3213591 |
|---|
| End bp | 3214055 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123394 |
|---|
| Product | flavodoxin |
|---|
| Protein accession | YP_738758 |
|---|
| Protein GI | 114048208 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0369] Sulfite reductase, alpha subunit (flavoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TTAATCTGGT GTTTGGCACT GTGTATGGTA GCGCACAATT TACCGCCGAA
ACCTTAGAAA AAGCGCTGAC AGAACTCGGT TATGACGCCA AATTGTGGCA ACCGAATGAA
ATTAGCCAAT TTACGCCGCC ACAGGATGAG TTGTTAGTGG TGGTGACCTC GACCACTGGG
CAAGGGGATT TACCCGACGA TATCCAGCCT TGGTACTATC ATCTTAAGGA GACGGCGCCT
TATCTGCCTG AGCTGAAATA CAGTGTGATA GCACTCGGCG ATTCGAGTTA CGATACCTTT
TGTGGTGCGG GTAAATCGGT AGATGAATTG CTCAGCGAGC TAGGCGCTAA GCCCGTTGTG
GCGCGTCTTG AAATTGATGC CTGTGAAACC ATGGAACCCG AGGTCGAAGC GATAAAATGG
TTGGAAAGCT GGAATCAAAT CGTCAAATCC GAACGCGCCG CTTAG
|
|---|
| Protein sequence | MKKVNLVFGT VYGSAQFTAE TLEKALTELG YDAKLWQPNE ISQFTPPQDE LLVVVTSTTG
QGDLPDDIQP WYYHLKETAP YLPELKYSVI ALGDSSYDTF CGAGKSVDEL LSELGAKPVV
ARLEIDACET MEPEVEAIKW LESWNQIVKS ERAA
|
|---|
| |