Gene Shewmr7_2715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2715 
Symbol 
ID4255497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3212158 
End bp3213639 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content52% 
IMG OID638123393 
ProductPTS system, glucose-like IIB subunint 
Protein accessionYP_738757 
Protein GI114048207 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components 
TIGRFAM ID[TIGR00826] PTS system, glucose-like IIB component 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGGAA AGCTGGAATC AAATCGTCAA ATCCGAACGC GCCGCTTAGG TCATTTCGTT 
ACTCAGCAGT GGTTTAAATT TGCCCAGCGC TTAAGTCAGG CGCTGTTAAT TCCTATTGCG
ATTTTGCCCG CAGCGGGTGT GATGTTGGGC TTAACTGTGA GCCCAATCCC TTTTATGCCC
GAGGTGCTAA CCGTATTAAT GCTGGCGGTT GGCAAGCTGA TTTTCGCCAT CATGCCCATT
TTGTTCGCGG TGGCGGTGGC GATAGGGTTT TGCCGCGATC AAGGCATCGC CGCTTTTACT
GCCGTATTTG GTTATGGGGT GATGACGGCC ACCTTAGCCG CGCTAGCGGA TCTTTACCAA
CTGCCGACCC AATTACTGCT CGGCATGGAA ACCTTAGACA CAGGGATTGC CGGCGGCATG
TTAATAGGTG GCGTGACTTG CTTTGCCGTG CGCTGGAGTC AATATATTCG CCTGCCCGCG
ATTTTCTCCT TTTTTGAGGG GCGACGTAGC GCCTCTTTAT TGATCATTCC GTTGGCGATG
GGTTTAGGTT ATATCCTTGC CCATGTGTGG CCGCCGTTAT CTCTGCTCAT CGAGCATGTG
TCCGACTGGG CGGTTTACCA AAAGCCGGCC ATTGCCTTTG GGGTTTATGG CGCGCTCGAA
CGTTTACTCA TTCCCCTCGG TTTGCATCAT ATCTGGAATG CGCCTTTCTA TTTAGAAGTT
GGCCAATACC AGTTACAGAA CTCTGAAGTG GTTCGGGGGG AAGTGGCACG CTATTTAGCC
GGCGATCCGC AGGCAGGGAA TTTAGCGGGC GGTTATTTGA TTAAAATGTG GGGACTCCCC
GCTGCGGCGC TGGCCATTTG GCGCTGCGCC GATCCTTCGG AGCGTAATCG GGTCGCGGGA
ATTATGCTTT CTGCTGCTGC GGCCAGTTGG CTGACCGGAG TCACTGAGCC GATTGAGTTC
GCCTTTATGT TTGTGGCACC TATCTTGTTT CTTATCCATG TGTTGCTGTC GGGATTGGCA
TATTTTGTCT GCATCATGCT CGATATTCAC CACAGTATCG TGTTCTCCCA TGGGCTGGTG
GATTTCACGC TGCTGTTTTC CCTCTCGCGC AATACGGGCT GGTTTGTATT CTTAGGGCCG
CTGACGGCGC TGATTTATTA CCTGCTGTTT AGGGGAAGTA TTCTGGCATT TAATTTAAAG
ACGCCAGGAC GACTCGAACC CGATGAACCC CATGGCGCCA AAGAGAGCTT AAGAGCCATC
ATTGCGGCAT TAGGAGGTCG TGAGAATATT GTCGAACTTA ATGCTTGTCT TACTCGGTTA
CGCTTGAGTG TGCACAGCCC GGAGCTCGTC AATAAAGTGC GGCTCAGCCA GCTCGGTGCT
AAGGGCGTGA TTGTGATGGG CAAAGGCGTT CAAGTGGTCT ACGGCACTAA GGCCGAAACC
CTACGCAAAG TCTTGCAGCG CTATTTAGAT ACGAGGCGCT GA
 
Protein sequence
MVGKLESNRQ IRTRRLGHFV TQQWFKFAQR LSQALLIPIA ILPAAGVMLG LTVSPIPFMP 
EVLTVLMLAV GKLIFAIMPI LFAVAVAIGF CRDQGIAAFT AVFGYGVMTA TLAALADLYQ
LPTQLLLGME TLDTGIAGGM LIGGVTCFAV RWSQYIRLPA IFSFFEGRRS ASLLIIPLAM
GLGYILAHVW PPLSLLIEHV SDWAVYQKPA IAFGVYGALE RLLIPLGLHH IWNAPFYLEV
GQYQLQNSEV VRGEVARYLA GDPQAGNLAG GYLIKMWGLP AAALAIWRCA DPSERNRVAG
IMLSAAAASW LTGVTEPIEF AFMFVAPILF LIHVLLSGLA YFVCIMLDIH HSIVFSHGLV
DFTLLFSLSR NTGWFVFLGP LTALIYYLLF RGSILAFNLK TPGRLEPDEP HGAKESLRAI
IAALGGRENI VELNACLTRL RLSVHSPELV NKVRLSQLGA KGVIVMGKGV QVVYGTKAET
LRKVLQRYLD TRR