Gene Shewmr7_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2704 
Symbol 
ID4255486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3199661 
End bp3200488 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content47% 
IMG OID638123382 
Productundecaprenyl pyrophosphate synthetase 
Protein accessionYP_738746 
Protein GI114048196 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000108534 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00267943 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCATCCA CAGTGGAATT TGATCCGCAA TCTAGGTCGA CTGAGCAGGA TGCTTGTGCT 
CAGACAAGCT TACCTGAGGT ATTACCTGAA CTCGTAAAAC AGTCATTACC TAAACATGTT
GCGATTATTA TGGATGGTAA TGGACGTTGG GCCCAAACCC AGGGCAAACC ACGAGTCATG
GGGCATAAAG CCGGCGTAAA GGCGGTGAGA CGTGCGGTGA GTGCGGCCAG TCAGTTAGGA
ATACAATCGC TGACGCTATT TGCGTTTTCC AGCGAGAATT GGCGCAGACC CGATAAAGAA
GTCAGCTTGC TGATGGAACT GTTTTTTACC GTGTTGCAAC GGGAAATTAA GTTGCTGGAT
AAAAACCAGG TCAGACTGAA TATCATCGGC GATATCAGCC GTTTTTCTGC GCGTTTACAA
AAACAAATTC GTGCCGCAGA AGAAAAAACT GCCAGTAATA ATGGATTGAT ATTGAATGTG
GCGGCCAATT ACGGCGGTCG TTGGGACATA CTGCAAGCTG CGCAAAAGTT AGCTGAAAAG
GTGGAAACTG GTGAAATGAC CAGCAGTCAG TTCACCGAAG AAGCCTTGAG TGAACATTTA
TGCATGCAAA ATCAGAGTGA AGTTGATTTA ATGATCCGTA CTGGTGGGGA TTACCGGATC
AGCAATTTTG TGCTCTGGCA GGCTGCCTAT GCTGAATTGG TGTTTTTGGA CACCCTTTGG
CCTGATTTCG ATGAACAGGC TTTTCATGAA GCGATTGCCA CTTTTGCCAG TCGCCAGCGC
CGTTTTGGTT TGACCGGAAG TCAAATTGAT GAGATGCGCG CATTGTAA
 
Protein sequence
MSSTVEFDPQ SRSTEQDACA QTSLPEVLPE LVKQSLPKHV AIIMDGNGRW AQTQGKPRVM 
GHKAGVKAVR RAVSAASQLG IQSLTLFAFS SENWRRPDKE VSLLMELFFT VLQREIKLLD
KNQVRLNIIG DISRFSARLQ KQIRAAEEKT ASNNGLILNV AANYGGRWDI LQAAQKLAEK
VETGEMTSSQ FTEEALSEHL CMQNQSEVDL MIRTGGDYRI SNFVLWQAAY AELVFLDTLW
PDFDEQAFHE AIATFASRQR RFGLTGSQID EMRAL