Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2704 |
Symbol | |
ID | 4255486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3199661 |
End bp | 3200488 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123382 |
Product | undecaprenyl pyrophosphate synthetase |
Protein accession | YP_738746 |
Protein GI | 114048196 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000108534 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00267943 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCATCCA CAGTGGAATT TGATCCGCAA TCTAGGTCGA CTGAGCAGGA TGCTTGTGCT CAGACAAGCT TACCTGAGGT ATTACCTGAA CTCGTAAAAC AGTCATTACC TAAACATGTT GCGATTATTA TGGATGGTAA TGGACGTTGG GCCCAAACCC AGGGCAAACC ACGAGTCATG GGGCATAAAG CCGGCGTAAA GGCGGTGAGA CGTGCGGTGA GTGCGGCCAG TCAGTTAGGA ATACAATCGC TGACGCTATT TGCGTTTTCC AGCGAGAATT GGCGCAGACC CGATAAAGAA GTCAGCTTGC TGATGGAACT GTTTTTTACC GTGTTGCAAC GGGAAATTAA GTTGCTGGAT AAAAACCAGG TCAGACTGAA TATCATCGGC GATATCAGCC GTTTTTCTGC GCGTTTACAA AAACAAATTC GTGCCGCAGA AGAAAAAACT GCCAGTAATA ATGGATTGAT ATTGAATGTG GCGGCCAATT ACGGCGGTCG TTGGGACATA CTGCAAGCTG CGCAAAAGTT AGCTGAAAAG GTGGAAACTG GTGAAATGAC CAGCAGTCAG TTCACCGAAG AAGCCTTGAG TGAACATTTA TGCATGCAAA ATCAGAGTGA AGTTGATTTA ATGATCCGTA CTGGTGGGGA TTACCGGATC AGCAATTTTG TGCTCTGGCA GGCTGCCTAT GCTGAATTGG TGTTTTTGGA CACCCTTTGG CCTGATTTCG ATGAACAGGC TTTTCATGAA GCGATTGCCA CTTTTGCCAG TCGCCAGCGC CGTTTTGGTT TGACCGGAAG TCAAATTGAT GAGATGCGCG CATTGTAA
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Protein sequence | MSSTVEFDPQ SRSTEQDACA QTSLPEVLPE LVKQSLPKHV AIIMDGNGRW AQTQGKPRVM GHKAGVKAVR RAVSAASQLG IQSLTLFAFS SENWRRPDKE VSLLMELFFT VLQREIKLLD KNQVRLNIIG DISRFSARLQ KQIRAAEEKT ASNNGLILNV AANYGGRWDI LQAAQKLAEK VETGEMTSSQ FTEEALSEHL CMQNQSEVDL MIRTGGDYRI SNFVLWQAAY AELVFLDTLW PDFDEQAFHE AIATFASRQR RFGLTGSQID EMRAL
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