Gene Shewmr7_2703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2703 
Symbol 
ID4255485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3198783 
End bp3199640 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content47% 
IMG OID638123381 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_738745 
Protein GI114048195 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0203173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00298681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCTAAAAC AACGTATAAT AACAGCAATT TGGTTAATTC CATTGGTTTT GGGAGCGATC 
TTTTTACTCC CCGTAGAGTA CTTTGCTTGG GCCTTAGTGG CCGTGTTTCT GATCGCCGCT
AAGGAGTGGG GCAGGATCAT CGATAGTCAA TGTGATGTGA CTCAATGGAG TTTTACTTGC
ACCGTCGGTA TTTTACTTAT CGCGTTGAAT TTAATTGTTC CCGCCGACAC TATTTGGCTT
AGGGGACAAA TTCACCCTAT CTATCTTGCC GTGATTGCCA TTGGAGCGCT GTGGTGGATG
GTGTCACTGT TATTGGTAGT GACTTATCCT AAAAGCGCCA AGCTGTGGCA AAAGAGTCCG
ATGTTAAAGT CCATGTTTGG ACAACTGACC TTAGTGCCTT GTTTTGTAGC ACTGATTGCA
CTCAAATCTA TTAGCTCGCA AATATCGCCT TATTATGGCG GCTCACTGGT ATTACTGGTG
ATGTTAATTG TCTGGGCGAC AGATTCTGGC GCGTATTTTG TGGGTAAAGC TATCGGCAAG
ACCAAGCTCA TGCCAGCAGT TAGCCCAGCT AAAACCTTAG AAGGTTTGCT CGGCGGCCTA
GTGACCACGC TAATCGTGGT GGCGGGTGTT ATGTATATTT CGCCTGAGCA AGAGTTAGGC
TTAGTGGTCG CGGTGACGAT TTTCGTGGCA CTGATTTCAG CCCTTGGTGA CTTATCTGAG
AGCATGTTTA AGCGTGCCGC CTGCATCAAA GACTCAGGCA CGATTCTGCC TGGGCATGGT
GGTGTGCTCG ACCGCATCGA CAGCCTCACC GCAGCCTTGC CGGTGTTTAC CTTAATCTAC
ATTGCATTTT GGATGTAA
 
Protein sequence
MLKQRIITAI WLIPLVLGAI FLLPVEYFAW ALVAVFLIAA KEWGRIIDSQ CDVTQWSFTC 
TVGILLIALN LIVPADTIWL RGQIHPIYLA VIAIGALWWM VSLLLVVTYP KSAKLWQKSP
MLKSMFGQLT LVPCFVALIA LKSISSQISP YYGGSLVLLV MLIVWATDSG AYFVGKAIGK
TKLMPAVSPA KTLEGLLGGL VTTLIVVAGV MYISPEQELG LVVAVTIFVA LISALGDLSE
SMFKRAACIK DSGTILPGHG GVLDRIDSLT AALPVFTLIY IAFWM