Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2703 |
Symbol | |
ID | 4255485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3198783 |
End bp | 3199640 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123381 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_738745 |
Protein GI | 114048195 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0203173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00298681 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGCTAAAAC AACGTATAAT AACAGCAATT TGGTTAATTC CATTGGTTTT GGGAGCGATC TTTTTACTCC CCGTAGAGTA CTTTGCTTGG GCCTTAGTGG CCGTGTTTCT GATCGCCGCT AAGGAGTGGG GCAGGATCAT CGATAGTCAA TGTGATGTGA CTCAATGGAG TTTTACTTGC ACCGTCGGTA TTTTACTTAT CGCGTTGAAT TTAATTGTTC CCGCCGACAC TATTTGGCTT AGGGGACAAA TTCACCCTAT CTATCTTGCC GTGATTGCCA TTGGAGCGCT GTGGTGGATG GTGTCACTGT TATTGGTAGT GACTTATCCT AAAAGCGCCA AGCTGTGGCA AAAGAGTCCG ATGTTAAAGT CCATGTTTGG ACAACTGACC TTAGTGCCTT GTTTTGTAGC ACTGATTGCA CTCAAATCTA TTAGCTCGCA AATATCGCCT TATTATGGCG GCTCACTGGT ATTACTGGTG ATGTTAATTG TCTGGGCGAC AGATTCTGGC GCGTATTTTG TGGGTAAAGC TATCGGCAAG ACCAAGCTCA TGCCAGCAGT TAGCCCAGCT AAAACCTTAG AAGGTTTGCT CGGCGGCCTA GTGACCACGC TAATCGTGGT GGCGGGTGTT ATGTATATTT CGCCTGAGCA AGAGTTAGGC TTAGTGGTCG CGGTGACGAT TTTCGTGGCA CTGATTTCAG CCCTTGGTGA CTTATCTGAG AGCATGTTTA AGCGTGCCGC CTGCATCAAA GACTCAGGCA CGATTCTGCC TGGGCATGGT GGTGTGCTCG ACCGCATCGA CAGCCTCACC GCAGCCTTGC CGGTGTTTAC CTTAATCTAC ATTGCATTTT GGATGTAA
|
Protein sequence | MLKQRIITAI WLIPLVLGAI FLLPVEYFAW ALVAVFLIAA KEWGRIIDSQ CDVTQWSFTC TVGILLIALN LIVPADTIWL RGQIHPIYLA VIAIGALWWM VSLLLVVTYP KSAKLWQKSP MLKSMFGQLT LVPCFVALIA LKSISSQISP YYGGSLVLLV MLIVWATDSG AYFVGKAIGK TKLMPAVSPA KTLEGLLGGL VTTLIVVAGV MYISPEQELG LVVAVTIFVA LISALGDLSE SMFKRAACIK DSGTILPGHG GVLDRIDSLT AALPVFTLIY IAFWM
|
| |