| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2702 |
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| Symbol | |
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| ID | 4255484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3197588 |
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| End bp | 3198778 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123380 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_738744 |
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| Protein GI | 114048194 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.101333 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00311588 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAAATA TGGTGATTTT GGGTGCTACT GGGTCGATTG GTGCCAGCAC TTTAAGTGTG
ATTTCGGCCA ATCCCGATGC CTATCGCGTA TACGCTTTAG TGGCGAATGC GAGTGTCGAT
AAGATGCTCG CCCTGTGTGT GACCCATCGC CCCCAAGTCG CCCATATGGT CGATAGTCAG
GCCGCATTAG CGCTACAAGC CAAGCTTCCC CCCGAGCTTA ATATTCAAGT CAGTAGCGGT
GAGGATGAAC TCATTGCCTT AGTCACAGCC ACTGAAGTGG ATACTGTGAT GGCCGCTATC
GTCGGTGCGG CGGGGCTTGT GCCCACCTTA GCCGCCGTCA AGGCGGGTAA ACGGGTATTG
CTTGCCAATA AAGAGGCGCT GGTAATGTCT GGCGAGCTGT TTATTGAGGC CACTAAAGCT
TCGGGCGCCA CTTTGCTGCC CGTTGACAGT GAGCACAATG CGATTTTCCA ATGCTTACCC
GAAGAGGTGC AGGCCAATTT AGGCCGCTGT GATTTAGCCG CATCGGGAAT TTCCCATATT
TTGCTGACAG GCTCTGGCGG CCCCTTTTTG ACCGCTGAGC TTGCAAGTCT TGCAGCGATG
ACACCTGCGC AGGCCTGTAA ACATCCAAAC TGGTCGATGG GGCCGAAAAT TTCAGTCGAC
TCCGCCACTA TGATGAATAA AGGTTTGGAG TTTATCGAAG CGCGCTGGCT GTTTAATACT
CAGAACGACC AATTAAAGGT GGTTATCCAT CCGCAGAGTG TTATCCATTC GATGGTGCAA
TACCGTGATG GCAGTGTTAT CGCGCAAATG GGTAACCCGG ATATGCGTAC GCCGATTGCG
CATTGTATGT CCTATCCACA AAGAATTAGC TCTGGCGTTG AACCTTTGGA TTTTTTCAAA
GTCGGACAGT TAAGCTTTTG TGAACCAGAC TTTAATCGCT TTCCCTGTTT GGCATTAGCG
ATTGCCGCTT GCGCCCAAGG CCAAGAGGCC ACAACTGTGC TCAATGCCGC CAATGAGATT
GCCGTTGAGG CATTTTTACA GGGGCAGATT GGTTTTACCC ATATCGCTAA GGTGAATGAA
GCGTGTTTAT CATCAGTGCC TAAACGGGCA ATGACCAGCA TCGATGATAT TATTGCCCTC
GATGCGCAAA CGCGGATATA TGCCCGCGAA CAGTTAGCGA AATTGGCTTA A
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| Protein sequence | MQNMVILGAT GSIGASTLSV ISANPDAYRV YALVANASVD KMLALCVTHR PQVAHMVDSQ
AALALQAKLP PELNIQVSSG EDELIALVTA TEVDTVMAAI VGAAGLVPTL AAVKAGKRVL
LANKEALVMS GELFIEATKA SGATLLPVDS EHNAIFQCLP EEVQANLGRC DLAASGISHI
LLTGSGGPFL TAELASLAAM TPAQACKHPN WSMGPKISVD SATMMNKGLE FIEARWLFNT
QNDQLKVVIH PQSVIHSMVQ YRDGSVIAQM GNPDMRTPIA HCMSYPQRIS SGVEPLDFFK
VGQLSFCEPD FNRFPCLALA IAACAQGQEA TTVLNAANEI AVEAFLQGQI GFTHIAKVNE
ACLSSVPKRA MTSIDDIIAL DAQTRIYARE QLAKLA
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