| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2695 |
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| Symbol | lpxB |
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| ID | 4256056 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3189525 |
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| End bp | 3190682 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123373 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_738737 |
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| Protein GI | 114048187 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.240899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00356669 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAAA AATCTCAATT AGTGTTTGCA ATGGTCGCCG GAGAACTCTC CGGCGATATT
TTAGGTGCAG GTTTAATGGC CGCACTGCAA AAAACACACC CCAACGCCCG TTTTGTCGGT
ATTGGTGGAC CTCGTATGGA AGCCCTTGGC TTCGAATCCC TGTTCGCGAT GGAAGAATTA
GCCGTGATGG GGATAGTCGA AGTGCTATCA CGCTTGCCAC GCTTACTCCA TGTGCGCTCA
TCCCTGATTA AGTCCATCAC CGAACTTAAG CCCGATTGTT TTATCGGGAT CGATGCACCG
GATTTTAATA TCGGTCTCGA GCTTAAGTTA AAGGCGCAGG GGATTAAAAC CGTTCACTAC
GTGAGCCCTT CGGTATGGGC ATGGCGTCCT AAGCGTATTT TTAAAATCGC TAAGGCCACC
AATATGGTGC TGTCGTTATT GCCCTTTGAG AAGGCTTTTT ACGATAAACA TCAGGTGCCT
TGTACCTTTG TCGGCCATAC CTTGGCCGAC GATATTCCGT TAGAGAGTGA TAAGGCGAGC
GCCCGTCAGT TGCTTGAACT CGATCCTGAT GCCGAATACC TCGCGATTTT ACCCGGCTCA
CGCGGCGGCG AATTAAAGCA ATTGGCCGAG CCTTTCGTGA AGGCGGCGCT GCTTATCAAG
CAACAATTTC CCGATATTCG CTTTGTGACG CCTTTAGTGA ATCAAAAGCG CCGTGAGCAG
TTTGAGCAGG CATTAAAAGC GCATGCGCCG GATCTGGAAA TCCACATGGT GGAAGGCAAA
TCACGCGAAG TGATGGCTGC TGCCGATGGC ATTTTACTGG CGTCGGGTAC GGCAACCTTA
GAAGCTATGC TGATCAAGCG TCCAATGGTG GTGGCGTATC GAGTGAGTCC GCTGACCTAT
GAGATAGCGA AAACCATGAT GCAAGTGAAC CGTTTCTCCC TGCCGAATCT TTTAGCGGGG
CGAGACGTGG TGCCCGAGCT TATTCAGCAT GATTGCACGC CAGAGAAGAT TGCCGCTGCG
GTTGGCGTTG AGCTGAACCG CGACTTTGCG CCAATCAAAG CCGAGTTTGA GCGTTTACAC
CAGCTGCTGC GCTGCGATGC CAGCCAAAAG GCGGCCGAGG CGGTTTTGGC ACTGGTCGAC
GCTAAGGAGC TGAACTAA
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| Protein sequence | MSKKSQLVFA MVAGELSGDI LGAGLMAALQ KTHPNARFVG IGGPRMEALG FESLFAMEEL
AVMGIVEVLS RLPRLLHVRS SLIKSITELK PDCFIGIDAP DFNIGLELKL KAQGIKTVHY
VSPSVWAWRP KRIFKIAKAT NMVLSLLPFE KAFYDKHQVP CTFVGHTLAD DIPLESDKAS
ARQLLELDPD AEYLAILPGS RGGELKQLAE PFVKAALLIK QQFPDIRFVT PLVNQKRREQ
FEQALKAHAP DLEIHMVEGK SREVMAAADG ILLASGTATL EAMLIKRPMV VAYRVSPLTY
EIAKTMMQVN RFSLPNLLAG RDVVPELIQH DCTPEKIAAA VGVELNRDFA PIKAEFERLH
QLLRCDASQK AAEAVLALVD AKELN
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