| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2693 |
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| Symbol | dnaE |
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| ID | 4256054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3185302 |
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| End bp | 3188778 |
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| Gene Length | 3477 bp |
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| Protein Length | 1158 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638123371 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_738735 |
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| Protein GI | 114048185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00112631 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGATC CTCGTTTTGT GCATCTTCGT GTCCACAGTG ACTTCTCTAT GTCCGATGGT
GTGGCTAAGG TCAAACCCAT CCTCGCCCAA GTTGAGGCTA AGGGTATGGC TGCGGTGGCC
TTAACGGATC AAAACAACCT CTGCGGTCTG GTCAAGTTTT ATGGTGGTTG CCATGGTGCG
GGGATTAAGC CGATTATTGG CGCGGACTTT TGGATGCAAG TGCCGGGGTT TGATGACGAG
TTTTGTGCCT TAACCATTAT TGCGATGAAT AATGATGGCT ATCAAAATCT CACCCAAATC
ATCAGCCAAG CCTATCTACG GGGCCATGTG GCTGGGCGGG TGGTGATTGA CCAAGAGTGG
CTTGTCACCT ACAACGAAGG CATTTTATTG CTGTCTGGTG GGAAAGAAGG GGACGTGGGT
AAGGCGCTGC TTAAGGGCAA CAATACTCAA GTCGAGTCCT TATGCGAGTT TTATCAGCAA
CATTTTGAAG GGCGTTATTA CCTCGAATTA TTGCGCACGG GGCGCCCTGA TGAGGAGCGT
TACCTGCATA TGGCGGTGGG GCTCGCGCAG GAAAAGGGCA TTCCCGTGGT CGCCACCAAT
CAGGTGGTAT TTTTAAAACC CGAAGACTTC GAGGCCCATG AGATCCGCGT TGCGATCCAC
GATGGTTTTA CGCTTGCCGA TCCCCGCCGG CCTAAAAAAT ACAGCGAGCA GCAGTACCTT
CGCAGTGAAG AGGAAATGTG CGAGCTGTTT GCTGACATTC CTGCCGCGCT CGAAAATACC
GTTGAAATCG CCAAGCGTTG CAACGTTACC ATTCGCTTAT ACGAATACTT CTTACCGAAT
TTCCCCACCG GCGATATGTC GATTGAGGAT TTTCTAGTTG ATTGCTCTAA GAAGGGGCTC
GAAGAGCGTT TAGAGTTCTT ATTCCCCGAT CCACAAGTGC GCGCCGAGCG CCGCGGTGAA
TATGACGAGC GTCTCGATGT GGAGCTTAAG GTTATCAACC AGATGGGCTT CCCCGGTTAC
TTCCTTATCG TAATGGAGTT TATCCAGTGG GGTAAGGATA ACGGCATTCC TGTGGGGCCT
GGCCGTGGTT CGGGCGCTGG CTCGCTTGTG GCCTATGCCC TTAAGATTAC CGACTTAGAC
CCCTTAGAAT TCGACCTGCT GTTCGAACGT TTCTTGAACC CAGAGCGGGT ATCTATGCCC
GACTTCGACG TCGACTTCTG TATGGATAGA CGCGATGAGG TGATTGACCA CGTGGCCGAA
CTCTATGGCC GTGAGGCGGT ATCACAGATC ATTACCTTTG GTACCATGGC GGCCAAGGCG
GTTATCCGCG ACGTGGGTCG TGTACTCGGC CATCCCTATG GCTTTGTGGA CCGCATTTCT
AAGCTTATTC CTCCAGAGCC TGGCATGACA CTCGCCAAGG CCTTTGAGGT GGAACCTGCG
CTGCAGGAGT CCTACGATGC CGATGAGGAT GTGAAAGATC TTATCGACAT GTGCCGTAAA
CTCGAGGGGG TGACCCGTAA CGCCGGTAAG CATGCGGGGG GCGTGGTGAT TGCGCCCACC
AAGATCACCG ACTTCTCGCC GCTTTATTGC GACGCCGAAG GTAAAAACCC GGTAACCCAG
TTCGATAAGA ACGACGTGGA AACCGCCGGC TTAGTCAAAT TCGACTTCTT AGGGTTAAGA
ACCCTCACCA TCGTCGACTG GGCGCTGGAG ATGATCAACA AGGTGGAGGT TAAAAACGGC
CGTCCACCGG TGCGGATTGA GGCGATTCCC CTAGACGACC CAGCTTCGTT CCGCTTGCTG
CAACGCTATG AAACCACCGC GGTATTCCAG CTCGAATCCC GTGGTATGAA GGATTTGATT
AAGCGTCTGC AACCCGACTG TTTCGAAGAT ATGATCGCAC TCGTGGCATT GTTCCGCCCG
GGGCCTCTGC AGTCGGGCAT GGTGGATAAC TTTATCGAGC GTAAGCATGG TCGTGAAGAG
GTGTCTTACC CTGATTCTCA ATACCAGCAT GAATCCTTGA AGGAGCTGTT GTCGCCCACC
TACGGCATTA TTTTGTACCA AGAGCAGGTG ATGCAGATTG CGCAGGTGCT ATCGGGTTAT
ACCTTAGGCG GCGCGGACAT GCTGCGCCGC GCTATGGGTA AGAAAAAGCC CGAGGAGATG
GCCAAACAGC GCGGTACCTT TAAAGAAGGG GCGATTAAGA ACGGCGTCGA TGGCGAGTTG
GCGATGAAAA TCTTCGACTT AGTGGAAAAG TTTGCGGGCT ACGGCTTTAA CAAATCCCAC
TCCGCTGCGT ACGCGCTCGT GTCCTATCAA ACCCTGTGGC TCAAGACTCA CTTCCCGTCG
CAGTTTATGG CGGCGGTAAT GTCTGCCGAT ATGGACAACA CAGACAAAAT CGTCACCCTA
GTGGATGAAT GTGAGCGCAT GGGACTCACC ATTATTCCGC CGGATGTGAA CAAAGGTCTG
TTTAAGTTTA CCGTCGATGA TGATCTGCGT ATCGTTTACG GCATCGGCGC CATCAAAGGT
GTGGGTGAGG GGCCGGTTGA GTCGATTCTT GAGGCGCGTA AGGACGGCCC CTTTAAAGAT
TTATTCGACT TTTGCGCCCG TATCGATCTT AAAAAACTTA ACAAACGGGT GATTGAAAAG
CTTATCTGCG CGGGTGCCTT AGATGCGCTT GGGCCGCACC GCGCCTCTAT GATGGCCACC
TTGCCCGAGG CGATAAGCGC CGCCGATCAG CATGCGAAGG CCGAGGCCAT TGGCCAGCAT
GATATGTTTG GTCTGCTTAA CAGTGACCCT GAGGACAGCA AGCAACAGTT TGTCGAATGC
ACTCCGTGGC CCGATAAAAT TTGGCTCGAA GGGGAGCGTG AGACCTTAGG TCTATATTTA
ACTGGTCACC CGATTAATCA ATACCTTAAA GAGCTTAAGC ATTACACCTC TGGGCGCTTA
AAGGATGTGC ATCCAACCGA TCGCGGCAAA ACCGTGAAGG CGGCAGGCCT TGTGGTTGCA
ACTCGGGTGA TGCTCACTAA GCGTGGATCG AAAATGGGCC TGCTGACGCT AGATGACAAG
AGTGCACGCC TCGAGGTGAT GCTCTTTACC GAAGCTTTTG AGAAGTTTAA CCATCTGCTC
GAGAAGGACA GGATCCTGAT CTGCGAAGGT GAAGTCAGCT TCGATGATTT TGCCGGTGGC
AACCGCATGA CGGCGCGCAA TATTATCGAT ATCAGCGAGG CGCGCAGCCA CTTTGCCAGC
GCCTTAGAAA TCGATTTAGA CGCATCGCAG TTAAATCCAA GCGTGCTCGA AAGTATCGAG
CAATCGATAA GCCCGTGGCG CAACGGTGCC GTACCCGTGG TGATTAACTA CAGTCAAGCG
CAGGCCAAGG GCCAATTTAG GTTGGCGGAA CATTGGCGAG TCAACCCCAG CGATGAATTG
GTTTTTGCCC TTGAGAGCCT CTTGGGGCCA AATAAGGTGC GGATCCTGTT CCCCTAA
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| Protein sequence | MSDPRFVHLR VHSDFSMSDG VAKVKPILAQ VEAKGMAAVA LTDQNNLCGL VKFYGGCHGA
GIKPIIGADF WMQVPGFDDE FCALTIIAMN NDGYQNLTQI ISQAYLRGHV AGRVVIDQEW
LVTYNEGILL LSGGKEGDVG KALLKGNNTQ VESLCEFYQQ HFEGRYYLEL LRTGRPDEER
YLHMAVGLAQ EKGIPVVATN QVVFLKPEDF EAHEIRVAIH DGFTLADPRR PKKYSEQQYL
RSEEEMCELF ADIPAALENT VEIAKRCNVT IRLYEYFLPN FPTGDMSIED FLVDCSKKGL
EERLEFLFPD PQVRAERRGE YDERLDVELK VINQMGFPGY FLIVMEFIQW GKDNGIPVGP
GRGSGAGSLV AYALKITDLD PLEFDLLFER FLNPERVSMP DFDVDFCMDR RDEVIDHVAE
LYGREAVSQI ITFGTMAAKA VIRDVGRVLG HPYGFVDRIS KLIPPEPGMT LAKAFEVEPA
LQESYDADED VKDLIDMCRK LEGVTRNAGK HAGGVVIAPT KITDFSPLYC DAEGKNPVTQ
FDKNDVETAG LVKFDFLGLR TLTIVDWALE MINKVEVKNG RPPVRIEAIP LDDPASFRLL
QRYETTAVFQ LESRGMKDLI KRLQPDCFED MIALVALFRP GPLQSGMVDN FIERKHGREE
VSYPDSQYQH ESLKELLSPT YGIILYQEQV MQIAQVLSGY TLGGADMLRR AMGKKKPEEM
AKQRGTFKEG AIKNGVDGEL AMKIFDLVEK FAGYGFNKSH SAAYALVSYQ TLWLKTHFPS
QFMAAVMSAD MDNTDKIVTL VDECERMGLT IIPPDVNKGL FKFTVDDDLR IVYGIGAIKG
VGEGPVESIL EARKDGPFKD LFDFCARIDL KKLNKRVIEK LICAGALDAL GPHRASMMAT
LPEAISAADQ HAKAEAIGQH DMFGLLNSDP EDSKQQFVEC TPWPDKIWLE GERETLGLYL
TGHPINQYLK ELKHYTSGRL KDVHPTDRGK TVKAAGLVVA TRVMLTKRGS KMGLLTLDDK
SARLEVMLFT EAFEKFNHLL EKDRILICEG EVSFDDFAGG NRMTARNIID ISEARSHFAS
ALEIDLDASQ LNPSVLESIE QSISPWRNGA VPVVINYSQA QAKGQFRLAE HWRVNPSDEL
VFALESLLGP NKVRILFP
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