Gene Shewmr7_2685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2685 
Symbol 
ID4256046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand- 
Start bp3172677 
End bp3173771 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content52% 
IMG OID638123363 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_738727 
Protein GI114048177 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones0 
Fosmid unclonability p-value0.0000452472 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCATGTGC CTAATGGCGA GCCAGAATCA ACAGTAACAG TATTGTTAAC TGGCGCAGAT 
AGCCAACTGT CTAAGGCTTT ATTACGAGTG CTTGCCAAGG CGGCAAATAG ATTCGATGGC 
CGCGTCTTTC GTGTGGACGC GCTTAGCCAT GCCCAGTTAG ACATCTGTGA TAAACAGAGC 
GTTGAAGCTG CCTTTGCCCA CTTTAACCCT GAGTGGGTGA TCAACTGCGC CGCCTACAAT 
GCGGTCGATA GGGCGGAAAC GGCGGCCGTT GAGGCTTATC GTGTCAATAG CCTAGGGCCT 
GAGTTATTGG CAAGCGAATG TGCGCTTACT GGCGCGCGTT TGGTGCATAT CTCCAGCGAT 
TACGTATTTA GTGGCGAGCA AGCGGAGGTA GCTTCACAGG CATTAAATCA GTGCGGGATA 
ACCCGCAGTG GCTTAATTGA AAGTGGCTTA ATTGAAAGCG GCTTAACTGA AGGCGGGTTA 
ACTGAAAACG CCATGCCTGC GCCCTTATCT GTCTACGGCC AGAGTAAACT CGCGGGGGAG 
CAAGCGGTGC TGCGTATTTT GGCTGAGCGC GCGGTGGTTA TTCGCACCGC ATGGCTCTAC 
GGTGTCGATG GACATAATTT TGTGAAAACC ATGCTGAGGT TGATGGCTGC TGCGCCAGAT 
GCTCAGCCAC TTACCGTGAT AAACGACCAA ATAGGTTCGC CAACATGGGC AGATGCGCTC 
GCACATCTTA TTTGGCAGTT GATAGCGAGT CCGTTAAACG TCGGTTGCGG AACTGGATTA 
TTCCATTATG CCGGGCAGGG GCAATGCAGT TGGTATGAAT TTGCCCTCGA AATCCAGCGC 
CAAGCCTTGG CACTGAAGTT ATTAGATAAA ACCGTGCCGA TTAGCGCCAT AGATAGCCTA 
AGTTATGCGG CAAAAGCGCT TGAGAAAGGC AATAAACTGG CATCAAGACC CAGTTACAGC 
GCGCTAAATA GCGATAGAGT GCGCCAGTGC TTAACTGGGC AAAATTCGAC ATCAACCCAT 
AGCTCCGAGC TGTGGCGTGA CTGGCGGTCG CAGCTTAAGG CCATGCTCGA GGATTATGCC 
GCGCAAGTTT ATTAA
 
Protein sequence
MHVPNGEPES TVTVLLTGAD SQLSKALLRV LAKAANRFDG RVFRVDALSH AQLDICDKQS 
VEAAFAHFNP EWVINCAAYN AVDRAETAAV EAYRVNSLGP ELLASECALT GARLVHISSD 
YVFSGEQAEV ASQALNQCGI TRSGLIESGL IESGLTEGGL TENAMPAPLS VYGQSKLAGE 
QAVLRILAER AVVIRTAWLY GVDGHNFVKT MLRLMAAAPD AQPLTVINDQ IGSPTWADAL 
AHLIWQLIAS PLNVGCGTGL FHYAGQGQCS WYEFALEIQR QALALKLLDK TVPISAIDSL 
SYAAKALEKG NKLASRPSYS ALNSDRVRQC LTGQNSTSTH SSELWRDWRS QLKAMLEDYA 
AQVY