Gene Shewmr7_2680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2680 
Symbol 
ID4255585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3166618 
End bp3168906 
Gene Length2289 bp 
Protein Length762 aa 
Translation table11 
GC content49% 
IMG OID638123358 
Productdecaheme cytochrome c 
Protein accessionYP_738722 
Protein GI114048172 
COG category 
COG ID 
TIGRFAM ID[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.463028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000643351 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATGAAAA ACTACAATAA ATCTCTACTG GCACTAGCAC TCACTAGTGC CTTGTTTTTA 
ACCGCCTGCG GGGACGGCAA AGACGGGCAA GATGGTGCAC CCGGCACACC AGGAACTCCT
GGAACGCCAG GAACACCTGG CACACCTGGT TTACCCGCTG GCTCGTTTGC TAAAACCGCT
GAATCTATAA CCGATCTGAA ATTTACCCTC AGCCCTGCAG ACATTAAAGT CACTAGCAGC
GAAGGCTTTA GTGTCAAATT CACCTTAACC GGAAAAAGCT CTGGCAAAGA TGTGCCCTTC
ATGGGACTCG ACAAAATTGC CCTTTATTCA TTAACGGCGA ATGAAAACAC CTCGGGCACG
GGCGCTCCCA TTCAGTGGCA AAACAATGCC ATGGCAAACA ATGCGGGCAG CTCATTAACT
TGTACACTCA ATGGCCTAAA CGGCACTAAG AATGCGTGTA CCTTAACCGA AGATACCGAA
AACCCAGGTA CTTACACAGC CACTTGGACC TATGATGGCG CTGCGCCCAT CATCAATCCA
AACGATAATC CAAATGCGGT GCATAGAGTC TTCGTTCGCG CTTACAACAT TGTCAACGCA
GCTGGCGTAG CCTTGTCAGA TAAAGTGCTC TCGGTACCTG TTGATTTTAT CCCTGCAACC
GATGAGCTTG CCGCATCAGG CAAAGACACA GTATCCAGCG CTGCATGTAA AAACTGTCAC
GGTGAAGTGG ACGGCCATAT CGCTAAGATT GAAGCCCACC ATAACTACCA AGACGTTAAA
AACTGCGTAA CCTGTCACAA CCCAGAGCAA GTCCCAAGCG ATGCGCAGCT CGCTGAAGGC
TGGGTATTTG ATTTCGCGCC GATGATCCAC CGTATCCATG CGGGTGAACA CAATGCGGAC
TACCTGTCTG GTGAAGCGAA AGAGTACTTC GGTGAAATTG GTTTCCCATC AGACTTGAAA
GAATGTAAAT CCTGTCACGA TGGTGCACCT AGCTATAACA CCAATATCTA CGCTCAGGCT
TGCGTGGGTT GTCATATCAA TGTCAACTTC GCAACCGGTG AAAACCACTC AGAATTTGGT
TTGGCTCAAG CCGATGATAC TCAATGTAAA TCCTGCCATG GCAGCGGTAG CTTAACGCCA
GAAGCGGTTC ACAGTGTTGG TAAACGTGCT GAATACGGCC CATTAATGAC CGTCGACTTT
ACCAGTGCAA CGCTGGGCAC TTCAGCAACA CTAGGTATGC AAACTCTGAC ATTGAAAGCC
AATGTCACAC TCAATGGCGC GCCTATTGCT GATGGTACTA GCCTGAAAAC CTACAATGCC
ACCAGCAACC CAACAGGTAT GTTTGCGGCA AACGGTCTGC TACTGGGTAA TGTGGCGACA
GATGGTACAG TGTACTCATG GCGCGATGTT AAGCCTTTAG CCATCAGCAT GAAACTGGAT
AACGGTACTC TGTCAGGTGG TGTATTAACC TTCGTGAAAG ATATTCCAGA TGCACAAGCA
ACTGGCACTA TCTACGTCGG TTCTGAAGCC AACTTCTGTG CGAAAGCGGG TAAAGCGGTG
AGCTGTAATA CCGACGGACT TGAATATGGT CCAACAAGCC CTGTGGGTAA CATCTCTGCG
GTTAAATTCT TCAACTTAAG CGGTGGCACT CCAGCTGTGG CCCGTATGAA GGATCCAGCG
CGGATTACGG TTGAAGAAGC AAAATGTAAC GCTTGTCATG GCAGCTTAGA CTATGCGAAA
GGCTACAGAC ACGGGGTTTA CACCTTCGAT CAATGTATGC ACTGTCACAA CGATACCACT
GGCGCTTCAG GTCATGGTCA AACTGGCTAC AAAGGCGAAG ATGGCAAGTT AGTCGTCACT
CCTGAAGTGA CCTTCAACAA CAAAGATCTG TTCACCGTGG CTCACCGCTT CCACAGTGGT
AACTTCGGTG TTGTAGAAGG CATCTTCCGC AATGCAGCTG GCGAACTAGA AGGTTATCCA
TCACCCGAAA CCGCATGTTC TGCCTGTCAC AAAGATGGCG CAACCCTGTT CGCAACTGAT
GGTGGCTTAA CTTCAGGCAA ACGTTCTATC AAAGTGGGCA GTAACTACAT TAGCCCTGTG
GCTGAATCCT GCCGCACCTG TCACGCTCAC TCAGATGCAG CTGCAGTGGC TCACTTTAGA
AGTAACGGCG CGATTGTAGA AGCGGATGCT GCAACCGATC CTAACCTACC AGTAGAATCA
TGCGCGACCT GCCATGCTGA AGGTAAAACC TATGGCATAG ATAAGGTACA CGCAGAGGTA
GCACACTAG
 
Protein sequence
MMKNYNKSLL ALALTSALFL TACGDGKDGQ DGAPGTPGTP GTPGTPGTPG LPAGSFAKTA 
ESITDLKFTL SPADIKVTSS EGFSVKFTLT GKSSGKDVPF MGLDKIALYS LTANENTSGT
GAPIQWQNNA MANNAGSSLT CTLNGLNGTK NACTLTEDTE NPGTYTATWT YDGAAPIINP
NDNPNAVHRV FVRAYNIVNA AGVALSDKVL SVPVDFIPAT DELAASGKDT VSSAACKNCH
GEVDGHIAKI EAHHNYQDVK NCVTCHNPEQ VPSDAQLAEG WVFDFAPMIH RIHAGEHNAD
YLSGEAKEYF GEIGFPSDLK ECKSCHDGAP SYNTNIYAQA CVGCHINVNF ATGENHSEFG
LAQADDTQCK SCHGSGSLTP EAVHSVGKRA EYGPLMTVDF TSATLGTSAT LGMQTLTLKA
NVTLNGAPIA DGTSLKTYNA TSNPTGMFAA NGLLLGNVAT DGTVYSWRDV KPLAISMKLD
NGTLSGGVLT FVKDIPDAQA TGTIYVGSEA NFCAKAGKAV SCNTDGLEYG PTSPVGNISA
VKFFNLSGGT PAVARMKDPA RITVEEAKCN ACHGSLDYAK GYRHGVYTFD QCMHCHNDTT
GASGHGQTGY KGEDGKLVVT PEVTFNNKDL FTVAHRFHSG NFGVVEGIFR NAAGELEGYP
SPETACSACH KDGATLFATD GGLTSGKRSI KVGSNYISPV AESCRTCHAH SDAAAVAHFR
SNGAIVEADA ATDPNLPVES CATCHAEGKT YGIDKVHAEV AH