Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2679 |
Symbol | |
ID | 4255584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3165127 |
End bp | 3166179 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123357 |
Product | LysR family transcriptional regulator |
Protein accession | YP_738721 |
Protein GI | 114048171 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.245615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000486304 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTGCCTTG GCGGAACAAT ACAACATGGC CATTGCAGAC TAAGACTCAT CCCAAGGCGA GACCAAATGA GCAACCCATT ACTAAAACAA ATCTGCGAAC TGGATGTCTT CACCTTATTG GTATTTAAAA GCATTTTTGA TAACGGACAT GCCAATAGTG CCGCCAAGGC GCTCAATGTA TCTGCGCCTA AAATTAGCCG CTGTCTTAAC GCGCTTCGCT TGACCTTTAA CGATGAACTG TTTTATCGCC GTCAGCAGGG GTTAAAACCC ACTCCCCTCG CCGAAAGTTT GTATGTCGCC ATTTGCCAAT TTACCGATTC GGTGTACTAC CTAGAGCAAT CGGCACTGCA AATTCAAAAT GCGGCAAGCC ATGTCGAGCG TCCGCTACAT ATCGCCGCGA GTAATGGATT ATTAAGCTTT TTAGCGCCCC AACTCTGTAC ACCCGAAGCA ATTAGCGAAC TCGGCCAAGT CAGGTTACAC AAATGGCAGG AAAACACTCC TGAATTAATC CACGCCGGGG AATTAGACTT TGGGATCACC ATAGAGCCGA CAGATACGAA AGACTTGAAT GTCTCCCGCT TAGGTTGTAT TTCCAATGTG TATGTAGTGG CCTCCAAGCT ACATCCCCTT TGGGAAAGCC AGCAAGAAAT CAGCCTAGAG CAAATCTGTC GTCATTCCTT TTTGTGCCTC GAGCTAAAAG GCTTTAATAG CCGTATTGAT CCGCTAGAAC TATTTTGCCA ACGCCAAGGG CTGCTGCTGC CATCGATTGA AAGGGTGATC GATCGAGAAG AATGGTATGC CCACTTGCTG ACCATGCAGA GCGTCGCCTT CTGCTCGAGT ATCGATATGC ATACGGTCAA GCATATGCCG GGGTTAAAAT TGGCGCCGCT TCCGGTATCG GAGCAACACC GTCTTCATGA GACTATTATG CCACCGCAGT ATTTTCTCGT TGAAAAGCCA CGAAGCCACA GACGCTATAG CCAAAACCAG TGCGAACTTG TAGTCAGCTC ATTGTTAACA GCCCTAACAA CCAACACTCG TGTCACTCAA TAG
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Protein sequence | MCLGGTIQHG HCRLRLIPRR DQMSNPLLKQ ICELDVFTLL VFKSIFDNGH ANSAAKALNV SAPKISRCLN ALRLTFNDEL FYRRQQGLKP TPLAESLYVA ICQFTDSVYY LEQSALQIQN AASHVERPLH IAASNGLLSF LAPQLCTPEA ISELGQVRLH KWQENTPELI HAGELDFGIT IEPTDTKDLN VSRLGCISNV YVVASKLHPL WESQQEISLE QICRHSFLCL ELKGFNSRID PLELFCQRQG LLLPSIERVI DREEWYAHLL TMQSVAFCSS IDMHTVKHMP GLKLAPLPVS EQHRLHETIM PPQYFLVEKP RSHRRYSQNQ CELVVSSLLT ALTTNTRVTQ
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