Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2672 |
Symbol | |
ID | 4255577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3158491 |
End bp | 3160029 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123350 |
Product | transcriptional regulator, TyrR |
Protein accession | YP_738714 |
Protein GI | 114048164 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG3283] Transcriptional regulator of aromatic amino acids metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0181063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0037784 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGCTTGG AAGTTAGCTG TCAAGATCGC GTGGGTTTAG CGAAAGACAT CTTAGTCGTG TTAGAACGTT ATGGCATTAA TCTCATCGCC ATCGATGCCA GTAACCAGGG CTTTCTCTAC CTGCAATTTG CCGAAATTAG TTTTGAAACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA GTGGAGAGTG TTCACGATGT GCGAACTGTG TCGTTTATGC CTTCGGAGCA GGAACACTAC GCCTTAAAAA CCCTACTCAA AACCCTCCCT GACTCAGTGT TCTCCATCGA CGTGAAGGCG CGCATTCGTA TCGTCAACGA GTCGGCGCTA CTCAATATGG GCATGGGGGA GCACGAAGTG CTCGATGAGT CCTTAAACCA TTGGGTGCAA GGGTTCAACT TCAGCCGCTG GCTCAGTGAG AGCCAAGTGT TGCCGCAGGC GGCGCGGGTC AATATCGGCC AAAACGAATA TTTGGCCGAA ATGTTACCGA TTTACCTACC CGATGAGGAT GATAAGACTA TCCTCGTGGG CGCAGTCGTA TCGCTTAAAT CGCCGGCGCG GGTCGGTAAA CAATTCAATG CACTGCAAAA TCAAACCGCG GGCTTTGAAA ATGTGTTAGC CAGCAGCGAC AAGATGAAAG AAGTGCTGAA ACAAGCCCGC CGCATGGCGC AGCTCGATGC GCCGCTATTA ATTACTGGCG AGACTGGCAC GGGCAAAGAG CTAATGGCTC GAGCCAGCCA TGATGCCAGC ATGCGCCGCG AGAAACCTTT TATCGCCATT AATTGCGCGG CACTGCCCGA TAGCGCCGCC GAAGAGGAAC TCTTTGGCTA CGTCAGCCAA GGCAAAGTGA TTAAGCGCGG CTTTTTTGAA GAAGCGAAGG GCGGCACAGT GTTCCTCGAT GAAGTGGCCG AAATGTCTAA GGCGGCGCAG GTTAAACTGC TGCGGTTATT ACAGGATGGC ACCTTTAGAC GCATTGGCGG TGACGAAGAA GTTCGCGCCG ATGTGCGGAT CATCTGCTCA ACCCAGAAAA ACTTAGCCGA GTTGTGTCAA ACCGGTGAGT TTAGGGAAGA TTTGTACTAT CGCATCCATG TGCTTAGCTA CCATATTCCA TCACTGCGTG AGCGCAAAGT CGATATCATT CCGCTGACGG AGATGTTCCT CGAGCACTAC AGTCAGCAAC TCTCGAGCCC GGTGAGACGA ATTTCGGCCC AATGCCGCGA TCATTTATTG ACTTATGCCT GGCCGGGTAA CGTGCGTCAG CTTAAGAATG CGGTCTTTAG GGCGGTATCT ATGTGGGATG GCTCGGGCGA GTTGACCGTT GAGCAACTTA AGTTGCCATC CTACGCCGAA GGTTTTGGCT ATTTCGATAA TGCTTTTGAA GGCAATCTCG ATGATGCGAT GAAGCAATTT GAGGCCAGCT TGCTGCGCCG CTTATATCCG GCTTACCCCA GTACTCGCCA ATTGGCGAAA AAATTAGGGG TGTCCCACAC GGCTATAGCC AACAAACTCA GGGAATACAA GATAGCCAAG CCAAAGTAA
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Protein sequence | MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDVKA RIRIVNESAL LNMGMGEHEV LDESLNHWVQ GFNFSRWLSE SQVLPQAARV NIGQNEYLAE MLPIYLPDED DKTILVGAVV SLKSPARVGK QFNALQNQTA GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVIKRGFFE EAKGGTVFLD EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ LKNAVFRAVS MWDGSGELTV EQLKLPSYAE GFGYFDNAFE GNLDDAMKQF EASLLRRLYP AYPSTRQLAK KLGVSHTAIA NKLREYKIAK PK
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