Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2671 |
Symbol | |
ID | 4255576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3157167 |
End bp | 3158153 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123349 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_738713 |
Protein GI | 114048163 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000904205 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00322221 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACTTG CCAGTTATAA CAATGGTCGC CGTGATGGCC AGCTGATGTT AGTGAGCCGC GATCTTACTC AAACGGTTGC CGTACCCGCG ATTGCCCACA CGATGCAACA ATTACTCGAT GGTTGGGATC TGCTCAAGCC ACAATTGCAA GAACTGTATG ATGCGCTGAA CGAAGGCAAA TTACCGAATG CGCAAGTCTT CGATGAAGCC AAATGTTTAT CACCTTTGCC ACGTGCGTAC CAGTGGGCCG ATGGTAGCGC CTATGTTAAC CATGTGGAAT TAGTCCGTAA GGCGCGCGGC GCTGAAATGC CTGAAACCTT CTGGACCGAT CCGCTGTTTT ACCAAGGCGG CTCTGACAGC TTTATCGCGC CAAAGGCGGA TATCCCACTG GCGAGCGAAG ACTGGGGCAT CGATTTCGAA TCGGAAATCG CCGTGATCAC CGATGATGTG CCTATGGGTG TGAGTGTTGA AAATGCTACC GCGCACATTA AGCTGTTGAT GTTAGTGAAC GACGTATCTC TGCGTAACCT GATCCCCGCA GAGCTGGCGA AAGGTTTCGG TTTCTTCCAA TCCAAACCTT CGAGCAGCTT CTCACCTGTC GCCATCACGC CAGATGAATT AGGCCACCGC TGGGAAGATT CAAAGGTGCA TTTACCGCTT ATCACCCATT TAAATGGCAA ACTATTCGGT CGCCCGAATG CGGGCGTGGA TATGACCTTT AACTTCAGTC AGTTAGTTTC TCATGTTGCT AAAACCCGTC CATTAGGCGC GGGCGCGATT ATCGGTTCGG GTACGATTTC TAACTATGAC CGCAGTGCCG GCTCAAGCTG TTTGGCCGAG AAACGTATGC TCGAAGTGAT CGCCGACGGC AAAGCCAGCA CGCCGTTTAT GCGTTTTGGC GACACTGTGC GCATCGAAAT GCTCGATGAT AACGGCGCAT CTATTTTTGG CTCTATCGAT CAAAAAGTGG TTGAGTACAA GGCGTAA
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Protein sequence | MKLASYNNGR RDGQLMLVSR DLTQTVAVPA IAHTMQQLLD GWDLLKPQLQ ELYDALNEGK LPNAQVFDEA KCLSPLPRAY QWADGSAYVN HVELVRKARG AEMPETFWTD PLFYQGGSDS FIAPKADIPL ASEDWGIDFE SEIAVITDDV PMGVSVENAT AHIKLLMLVN DVSLRNLIPA ELAKGFGFFQ SKPSSSFSPV AITPDELGHR WEDSKVHLPL ITHLNGKLFG RPNAGVDMTF NFSQLVSHVA KTRPLGAGAI IGSGTISNYD RSAGSSCLAE KRMLEVIADG KASTPFMRFG DTVRIEMLDD NGASIFGSID QKVVEYKA
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