| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2669 |
|---|
| Symbol | |
|---|
| ID | 4255574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3155537 |
|---|
| End bp | 3156124 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638123347 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738711 |
|---|
| Protein GI | 114048161 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3575] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000651556 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0126952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAA CGGAATTAGC TGCAGTATTA CGCACTTGGC TAAGCCAAGA TAAGCATCGG
ATGAGGGCGC TTACATTGGC GCAGCAATGC GCCCAAGTGC ATCGCTTGAC GCAGTGGTGC
TTGGCGGCGG GGTTTGTCCG TAATCTGGTG TGGGACAAAT TGCACGATAT TCAGCAGCGT
CCGTTAAACG ATATCGATCT GATTTACTAT TGCCCCTTGG ATACTCGTCC CGAGCGGGAT
AGGGCGATAG AAGCATACCT GCAAACACTG GCGCCAGAGT TACCTTGGTC GGTAAAAAAT
CAGGCGCGCA TGCATCTTAA AAATCACGAC AACCCCTATC AATCGACACA GGATGCAATG
TGCTATTGGC CAGAACAGGA AACTGCCGTC GCCGTGTATC TTGCGCCAAT TCCTAACACA
CCCACTTCCG TCATCGAGAG CTTACAGCTT ATCGCTCCCT TCGGTTTAAC CTCATTATTT
GCCTTGCAGT TAACCCATAA TCCAAAGCGT GCGTTGGCGG TATTTGAGCA TCGCCTTGCC
GCAAAGGGTT GGCTTTCGCA ATATCCGAGG CTGACTTTGG CCGAGTAA
|
|---|
| Protein sequence | MTETELAAVL RTWLSQDKHR MRALTLAQQC AQVHRLTQWC LAAGFVRNLV WDKLHDIQQR
PLNDIDLIYY CPLDTRPERD RAIEAYLQTL APELPWSVKN QARMHLKNHD NPYQSTQDAM
CYWPEQETAV AVYLAPIPNT PTSVIESLQL IAPFGLTSLF ALQLTHNPKR ALAVFEHRLA
AKGWLSQYPR LTLAE
|
|---|
| |