Gene Shewmr7_2650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2650 
Symbol 
ID4257182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3131670 
End bp3134360 
Gene Length2691 bp 
Protein Length896 aa 
Translation table11 
GC content47% 
IMG OID638123328 
ProductFAD linked oxidase domain-containing protein 
Protein accessionYP_738692 
Protein GI114048142 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC CGAAAATACC CCATAACGCT TCGGATACGT TAATCAACAC TGTGGCTCAA 
GCACAGAGCC AAGAGACAAC CGCCTCGATG AATTCACTTT CCTTAACGCC ATTGCCCCTC
AGTCACACAC TCGATGTATT TACTTTTCAG GCGTGGGTGA AAACCCTGCA GGGCGGGACT
GTATTTCAAT ATTGCGACCA AGCTAATTAT CCCAGCTTTA TCGTACAAGT TACGCCACTT
GGCCATATTG AGATTCGAGT TAATAGCCAG TTATTACAGA TTGACACTAT TTCCACCTTA
GGCGGCTTAA ATGATGGTTA TTGGCATTTA TTATCCATTA CCTACCAATA CCATGAATTA
AGCTGTTTTA TCGACGGTGA TGAAATCCAT TTACAACAGC ATTCAATCCC CTTAACGGAT
GAGGCTAAAT TAAAAGCCGC CACGCAAACC ACTACGATTT TTGATGGTGA GATAGTTAAT
ATCAACTTGA TTGAAACCTG TTTAACCGAA GCCGAAATTT TAGATTGTTA TTTACATCCA
CATCAGCAAG CGGCGCTGAT TGACAGTAAT TTATATATTT ATCCTAAAAA ACATGCAAAG
CACGAACTCC ACTTAATGCC AACTCAATTG GCAAGACAGG AAGTCATGCT CATTATATTT
AATGACACCG AATATAGTTT TAATAAGCAG AACTTAAACA GTAACCACTT TAATAAACAA
CTACCCAGTA TTATTCCCGC CCATGAACGC TGCGCTTATA TGATTGAATC CAGCAGTGAT
AATTGGCCAC ATTTTATTTA TAAGGCGAAT TATCAAGCGA AAGAAAGCGC CGATATCAAA
CTGAGCTTTG ATATTTTAAA ATCCCTCACG CCCCATCGTT CGCACATTGA TTTACAACTG
AGCAATGAAC TGGAATTTGA TTGTTTTATC AGCCTGTCGA CCTCGAGCCG ATTAACGGCC
GAGATCCGCA TCAGTGAAAA TGTGGTCACC CGACAAGCTA AGCATTTTAT GCGCTTTATT
AACGAAGTGC GCAGCCATAT TGCCAGCGAC CATATCATTA CCGATGGCCA GTATTATGCT
GAGCAGGATT TTTGGGTAAG CACGGGACAA CAGATGTTGG CCTACGAAAA AGCCTGCCAA
CTGTTTAATC GCCGCTTGCA AAAAAAGCCT CTTGCCATCA TCAAATGCCG CAGCAGCCAA
GAGGTAAAAC TGGTCTACAA GACGGCGGTC GATTATCACC TTGCGATTAG CGTGCGCTCC
AGCGGCCATG ATCACGAAGG GGAAAGTGGC GAGACCAATA GCATAGTGAT CGACTTATCC
TCGATGAACA GCATAGAGCT CGACCCCATC AGTGGCATTG TCGCCATTGG GCCAGGTTGT
ACCATGCAGG CGTTAACCCA CTTTCTCGCC CAAAAGGGCT TAATGCTGCC CCACAGCACC
AGCGCCTCCC ATGCCTTAGC GGGCTTTATT ATGGGCGGCG GTTGGGGACC TTGGTGTCGC
AAATACGGCA TGTGCTGCGA AAGCTTAGTG CAGGCAGAAA TCGTGTTGGG CATAGGTGAA
ACACAAGTGG TCTCGGCGGC CAATAAGCCC GAACTCCTTT GGGCGCTCAA GGGCGGCGGT
GGCTTAAGCT ACGGTATTGT GACCCGTTTT TTTGTGCAAA CCTTTGCCCT GCCCCCAAGC
CTGCTGAAAT TTGAGCTGGA GTGGAACCCG TATCAGAAGG ACAGCCAACA GCTACGAGAA
ACCACCCCAA CCTTAAGATT ATTAGAACGT TGGGAGCAGA TTATTCTGGC CGATAATCTG
CCTTGTTTGC TCGGAACTAA CCTTAAAATT CAAGCCAAAC CCGCCCTGTC GCAAGGGGTA
AAACCGCCAT TAAACACTGT GGTGCAGGCG CCCCAAGAGG CTAAACATAA CTGCATTATG
TACGGATATT GGGAGGGCAA TCCCGCAAGC CTTGCGCACT TTATTAAGGC CCAGTTTAGT
GATGTCGGTT TAAAACCTAA TCGGGTACAA ATGGCGGCCA TGGGCGGCTT AACTCAATCC
TATGGCGACG AATTGATGGA GAGCTGGAAC CGCGAAGCGA TTCAGGATTT ACAACCCGTC
TTAAACCATA GATTGGCTGA GCTGCTTAAT GATAAGGACA TACAACTCTA TAAAAATCAG
CGGCTACACT CACAGGATCT ACTCAGACCC GCGCCCCATA GAGTGACATC ACGCTTGGCC
CACGCACAGG GACTAAAACA GGGGCATATT GCGCTTATCG ACAGCCTCAC CTCATCCCAA
CTGATTGATG GAAATCGGCA ATTAGGCTTG TTTACCTATG TCACCCTAAG CGCAATTGCC
GGTGATTTTT ATCGCACGCT TAGTGAAGTA CAAAAAAGCC AGAGCGCCTT CCCCTACAAG
GAGCAGGCCT ACATTATTCA GTATCAAGCA TGGTGGAATA GTGAACTCCA AGAGCAAGCC
TTAATGCAGG TGAACTCTGT GTATCCCCGA GTGAATAAGG CGCTCGACTG GATAGACACC
TGCCGCGATG CCAGCATTGC CAATAGCTCG GGCGCCTTTA TCAGCTTTAA GGACAATACC
ATCCCGACCG CACGCTACTT TGGGCAAAAT TACCAAATGT TGCAGCAGGT TAAGGCCAGT
TATTGCCAAG ACCCCTTAAA TCATTTTCGC TCGCGTAAGT CGATTGTGTA G
 
Protein sequence
MKTPKIPHNA SDTLINTVAQ AQSQETTASM NSLSLTPLPL SHTLDVFTFQ AWVKTLQGGT 
VFQYCDQANY PSFIVQVTPL GHIEIRVNSQ LLQIDTISTL GGLNDGYWHL LSITYQYHEL
SCFIDGDEIH LQQHSIPLTD EAKLKAATQT TTIFDGEIVN INLIETCLTE AEILDCYLHP
HQQAALIDSN LYIYPKKHAK HELHLMPTQL ARQEVMLIIF NDTEYSFNKQ NLNSNHFNKQ
LPSIIPAHER CAYMIESSSD NWPHFIYKAN YQAKESADIK LSFDILKSLT PHRSHIDLQL
SNELEFDCFI SLSTSSRLTA EIRISENVVT RQAKHFMRFI NEVRSHIASD HIITDGQYYA
EQDFWVSTGQ QMLAYEKACQ LFNRRLQKKP LAIIKCRSSQ EVKLVYKTAV DYHLAISVRS
SGHDHEGESG ETNSIVIDLS SMNSIELDPI SGIVAIGPGC TMQALTHFLA QKGLMLPHST
SASHALAGFI MGGGWGPWCR KYGMCCESLV QAEIVLGIGE TQVVSAANKP ELLWALKGGG
GLSYGIVTRF FVQTFALPPS LLKFELEWNP YQKDSQQLRE TTPTLRLLER WEQIILADNL
PCLLGTNLKI QAKPALSQGV KPPLNTVVQA PQEAKHNCIM YGYWEGNPAS LAHFIKAQFS
DVGLKPNRVQ MAAMGGLTQS YGDELMESWN REAIQDLQPV LNHRLAELLN DKDIQLYKNQ
RLHSQDLLRP APHRVTSRLA HAQGLKQGHI ALIDSLTSSQ LIDGNRQLGL FTYVTLSAIA
GDFYRTLSEV QKSQSAFPYK EQAYIIQYQA WWNSELQEQA LMQVNSVYPR VNKALDWIDT
CRDASIANSS GAFISFKDNT IPTARYFGQN YQMLQQVKAS YCQDPLNHFR SRKSIV