| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2649 |
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| Symbol | |
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| ID | 4257181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3130590 |
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| End bp | 3131609 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123327 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_738691 |
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| Protein GI | 114048141 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.437238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAACT CACCGAAACT GGCACGCCAA CAACCCGCCT TATCCATTGT CGATGATGCT
GAATTGCCCG CAACTCAACC TGCAAAGAGT GCCGAGCTAC CGCTGAACTT TTTCGAGCAT
TCTTCCCTCG AGACCATTGA GCTCTTTATT CAACATTTAA CCGAAGCCGT GATCTTAGTG
AATGCCAATG GCTTTATCCG TTCGTGCAAT CAGCGCAGTG CCGAGTTGCT CGATTGCCCG
CAGGCGACTT TAAAGGGCCA AGACTGGCGC AATTTTTTGA CCGAACATCA TCAAGCGCGC
TATGACAATC TTCTGAGCCA CGATGTGCAA TTAGGCACCA ACTGTGGTCA CCCCGTGCAG
CACCCAGCAC AGGAAACCAC GCTGATTTGC GCCTCTGGCA AGGCCAAAGA TGTGGAGTTG
TCTATCTCTT ATATTCCCAG CCATGAACCT GTGTTTGTGA TGGTAATGCA CGATTTAACT
CAGCATAAGG CGGAAAACCA AAAGCTGCGC AAGTTGGCCG CCACCGACTC CCTCACCCAA
CTGGCGAACC GTCGCTATTT TGATGAAATG TTGCAACAAC ACTGGGAAGA ATGCACCGCC
AAACTGCGCC CTATCAGCGT AGTCATTATC GATGTGGATT ATTTTAAGGT GTTTAATGAT
CAGTTTGGTC ATATCCAAGG TGATGAATGC CTTAGAAAAA TTGCCAAAGT GATCGCCACT
ATTGTGCCAA TCGACATCGG CCTTGCGGCC CGTTACGGCG GCGAAGAGTT TGCGCTGATC
CTGCCTAATC ACAATGCCAA AATGGCGCTG ACCATAGCGC AAAAAATTCA GCAAGGGATT
AATAACATTC GTTTTACTGA CCAAGGGCTC AGGGATTATG TCTCGGTAAG CGCCAGCCAA
GGGATTGCCA GTGAAGTCAA TGGCCAGTTC CGTACCTCAC TCGCCATGGT GTGCGCCGCT
GATACCGCGC TTTACCGCGC CAAGGCCGAC GGTCGTGACC GGATAAACGC CTCACTGTAG
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| Protein sequence | MTNSPKLARQ QPALSIVDDA ELPATQPAKS AELPLNFFEH SSLETIELFI QHLTEAVILV
NANGFIRSCN QRSAELLDCP QATLKGQDWR NFLTEHHQAR YDNLLSHDVQ LGTNCGHPVQ
HPAQETTLIC ASGKAKDVEL SISYIPSHEP VFVMVMHDLT QHKAENQKLR KLAATDSLTQ
LANRRYFDEM LQQHWEECTA KLRPISVVII DVDYFKVFND QFGHIQGDEC LRKIAKVIAT
IVPIDIGLAA RYGGEEFALI LPNHNAKMAL TIAQKIQQGI NNIRFTDQGL RDYVSVSASQ
GIASEVNGQF RTSLAMVCAA DTALYRAKAD GRDRINASL
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