Gene Shewmr7_2646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2646 
Symbol 
ID4257178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3124914 
End bp3126242 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content56% 
IMG OID638123324 
Producthypothetical protein 
Protein accessionYP_738688 
Protein GI114048138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.458074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCTT TTACACTCCG CACCTTAAGC AAAATGGTCA GCCTCGTTAT CTTAGGTGGC 
CTGCTCGGTG CCTGTCAGGA TGAGGCGCCC GCGCCAGAGC CACAAAAAGA AGCCAGCCCA
ATGTATGCCA AGGGCTTAAC CTTAGCCGCG CCGACGCAGA GCGACCTTGT CGATACTAAT
ATCGCCTCAC CAACCCTAGC GCCGATTAAT ACCAGTACCG ATTACGTCAG CTTTATCACT
CCGCTCTACG GCGAATACCA AGCCAGTCAG CCCGTGCTTG AGCAGGCAAG CCAGAGTGAT
GAGTATTGGC TCAATGTCAC CGGCGCCGAG CTAAATGCTG GCGTGCAGCT CAATTTGAGC
CAAGCGGGCA GCTTAGTGCG GATTGCGCCC CGCGGCGATG TCAGCACAGG CGCCTTAATG
CATGCCGATG CCGTTGCCCC CGAGCGGGTG CAAATTCAGC GGATAGGCCA AACGCCGCAG
GGGAAAAACG CCAGCCCACA AGCCACGGAA TCCTTGGTTA AATCGCTGGT GAGCGCCGAC
GCCTTAGCCA GCGCAGGCTT AGCCGATGAC TCCAGCGCAC TGCAAATGTC TGAAAAGGCC
ACGGCCGGAG AATATCGCCT GCAAGTCAGC CAGCCCTTAG TCGCTAAGGC CAACTATCTG
GTCAACGTGA AGGAAAAAGG TTCGCCCTAT CAACTGAGTA TCAAGGCGCC CGGCGCAATT
GCGGCCGATG CCCAAACGGT TGGGGTAAAA CTCGCCTTAA GCCAAAGCGA TAATCAATTT
GCGCCTCAAG CCAAACTCAA GCAAGCCGAT GGCACAGAGC AAGCGCTGGC CATGGTGAAA
CAGGGGGATG AATGGCAGGC TTTAGTGCCC GCAGACTTAC CCCTTGCCAG CAGCAATGCG
GGGCTGAGTG AAATCGAAGT CACAGTCCAG ACTCAGGTCG ATGGCCGCCC AGTACAGCGC
ACGGTGAAAA CCGCGTTTAA GTCCTATGTA AACTCGGCCA GCATCAAACC CGAAGTGCTA
ACCGTTTGGG ATAAAGGCGT ACCGAATCAA GTCAACTTTG AGCTCGATAT CGCCGAAGCG
GGACGCTTTG GTTTGAGTGG CGTGCTAACG GGCACCAATG CCGAGGGTCA AAAAGTGGCG
ATTATGCGCA CCCAAGCGGC GACTTGGTTA ACGCCCGAAT CCCCCAAACT CAAGCTGATG
TTTGACCCAA CGCTCATCCA AGCATCGGGC CTGCAACCGC CCTTTGAACT CAACGAGCTA
GAGCTGCAAG ACCAAGGGCA AATGGCGCGG TTAAGTTTTC AGGCCAACGC ACTGGTGCTT
ACTCGCTAA
 
Protein sequence
MQPFTLRTLS KMVSLVILGG LLGACQDEAP APEPQKEASP MYAKGLTLAA PTQSDLVDTN 
IASPTLAPIN TSTDYVSFIT PLYGEYQASQ PVLEQASQSD EYWLNVTGAE LNAGVQLNLS
QAGSLVRIAP RGDVSTGALM HADAVAPERV QIQRIGQTPQ GKNASPQATE SLVKSLVSAD
ALASAGLADD SSALQMSEKA TAGEYRLQVS QPLVAKANYL VNVKEKGSPY QLSIKAPGAI
AADAQTVGVK LALSQSDNQF APQAKLKQAD GTEQALAMVK QGDEWQALVP ADLPLASSNA
GLSEIEVTVQ TQVDGRPVQR TVKTAFKSYV NSASIKPEVL TVWDKGVPNQ VNFELDIAEA
GRFGLSGVLT GTNAEGQKVA IMRTQAATWL TPESPKLKLM FDPTLIQASG LQPPFELNEL
ELQDQGQMAR LSFQANALVL TR