Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2643 |
Symbol | |
ID | 4255477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3122270 |
End bp | 3122971 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638123321 |
Product | TetR family transcriptional regulator |
Protein accession | YP_738685 |
Protein GI | 114048135 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTTA TTCCCAGCCG CCCCCGTGGG GTGGTGCCAT TTGCTACCCA TGCCGACACC TCCCAGGCGG CAGGCCGCCC TAAGGGCAAC TCAGATGCGC GCCAACGGCT GATCACCGCC GCCGTCAGCC TCTTTAGTGA ACGCAGTTAT CCCACTGTGT CGACCCGTGA AATTGCCCGA GTGGCCGAGG TGGATGCGGC GCTTATCCGT TATTACTTTG GTTCTAAGGC TGGGCTGTTT GAGCAGATGG TGCGCGAAAC CCTCGAGCCT GTAATTACCC GTTTACGAGA AGTGTCCACG GCGCAAGCGC CTAATAATGT GGGCGATTTA ATGCAAACCT ATTATCGGGT GATGGCGCCC AACCCCGGAT TACCGCGATT GATTGTCCGT GTGCTGCAGG AGAGCGATGG CACCGAAGCC TATCGGATCA TGCTGTCTGT GTTTGAGCAA ATGCTGTCCC TCTCGCGCCA ATGGCTCGAA GCCTCATTTG TTAGCGCAGG CATTCTCAAG GAGGGGCTAG ATCCCAATTT TGTGCGCCTC AGTTTTGTCA GTTTGATGGT GTTTCCGCTG ATCGCGCCTC CGGTATTGAT GCGTCAGTTT GGCCTATTTA GTACCAGTGG CACGGATTTA CAACGGTTAG CGCTACACAA TATGCAGGTA TTCACGCAGG GGGTGATGCG TGAACCTAGG AGTGAATTAT GA
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Protein sequence | MSLIPSRPRG VVPFATHADT SQAAGRPKGN SDARQRLITA AVSLFSERSY PTVSTREIAR VAEVDAALIR YYFGSKAGLF EQMVRETLEP VITRLREVST AQAPNNVGDL MQTYYRVMAP NPGLPRLIVR VLQESDGTEA YRIMLSVFEQ MLSLSRQWLE ASFVSAGILK EGLDPNFVRL SFVSLMVFPL IAPPVLMRQF GLFSTSGTDL QRLALHNMQV FTQGVMREPR SEL
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