| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2642 |
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| Symbol | |
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| ID | 4255476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3121260 |
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| End bp | 3122273 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638123320 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_738684 |
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| Protein GI | 114048134 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTAA CCAATAGGTT AACAGTTAGG TCAGTTAAGG CGCGGCAACC TTCTCCCCGA
GGATGGGGTA AGCTGCTGGC GAGTTTATTG GGCGCGGCGC TGTTACTGCA ATTGACGGCC
TGCGGCGATG AATCGCCCCG CGTGCTGGGC ACCGTCGAGC GCGACAGGTT AACCCTCACC
GCGCCTGTGG GGGAGCTGAT CAAGCGGGTT AATGTGGTCG AAGGCCAGCA AGTGCAGGCG
GGGGAAGTAT TACTCGAGCT GGACAGCACA GCCGCTCAGG CGCGCCTTGG CCAGCGTCAG
GCCGAGCTTA AACAGGCGCA GGCCAAACTA GACGAAGCCG TGACGGGGGC TCGCTCGGAA
GACATAGATA AAGCCCGCGC GGCCCTCGAT GGCGCCAATG CCAGCGTGAA AGAAGCGCGG
CAGAATTTTG AGCGTACGCA ACAGTTATTT AAGACTAAGG TGCTCAGCCA GGCGGACTTA
GATGCGGCGC GCGCGGCGCG TGATACCAGC CTTGCCAAGC AGGCCGAAGC CGAGCAGAGC
CTTAGACTGC TGCAAAACGG CACCCGTAGT GAGCAACTCG AGCAAGCCAG AGCCGCAGTC
GAGGCGGCCA TGGCTGGCGT GGCGCAGGAG CAAAAAGCCC TCAAGGATTT AAGCCTCGTA
GCGGCGAAAC CCGCAGTGGT GGATACCTTG CCTTGGCGGG TGGGCGACAG GGTGGCCGCA
GGTAGTCAAC TCATTGGTTT ATTAGCAATT GAACATCCCT ATGTGCGGGT ATATCTGCCA
GCAACTTGGC TCGATAGGGT TAAGGCGGGG AGCCAAGTGA AGATCCTTGT CGATGGCCGC
ACCCAGCCTA TTGCAGGCAC TGTGCGTAAT ATTCGCAGTC AACCGGCTTA CACTCCTTTT
TATGCGTTAA ATGAGCGAGA TAGGGCGAGG CTGATGTATC TCACCGATAT TGATATTGCG
CCAGAGGGAG AGGATTTACC CACGGGAATG GCCCTTGAGG TACTGCTGCC ATGA
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| Protein sequence | MILTNRLTVR SVKARQPSPR GWGKLLASLL GAALLLQLTA CGDESPRVLG TVERDRLTLT
APVGELIKRV NVVEGQQVQA GEVLLELDST AAQARLGQRQ AELKQAQAKL DEAVTGARSE
DIDKARAALD GANASVKEAR QNFERTQQLF KTKVLSQADL DAARAARDTS LAKQAEAEQS
LRLLQNGTRS EQLEQARAAV EAAMAGVAQE QKALKDLSLV AAKPAVVDTL PWRVGDRVAA
GSQLIGLLAI EHPYVRVYLP ATWLDRVKAG SQVKILVDGR TQPIAGTVRN IRSQPAYTPF
YALNERDRAR LMYLTDIDIA PEGEDLPTGM ALEVLLP
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