Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2641 |
Symbol | |
ID | 4255475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3120223 |
End bp | 3121263 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638123319 |
Product | ABC transporter related |
Protein accession | YP_738683 |
Protein GI | 114048133 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTC AACAGGCTTC AGCAGGGGGA TCAGACGCTG GGACATCAGC GGCAGAAACA TCAAGCGCGG CTTCTGAGTT TGCTATCGAA ACCCGCGGCA TGACCCGTGC CTTTGGCGGC ATCAATGCGG TCGAAGATCT CGATTTAGCT ATCCCTAAGG GCACGATTTA TGGATTTTTA GGCCCCAATG GTTGCGGTAA ATCGACCTCT ATTCGGATGT TGACTGGACT GCTGAGTCCG ACCTCGGGGG ATATTCGGGT GCTGGGCGAA ACCTTGCCCG GCGCCGAGGA AAAACTGCGC CGCCGCATTG GCTATATGAC GCAAAAATTC TCCCTCTACG ACAATTTGTC GGTACGGGAA AATCTCGAGT TTGTGGCACA AATTTATGGG CTGAATCGTC GCCAAACCAA GGCGCGTTTG GCCGAGTTAT TAAGCCTTTA CGATTTGGCG GGGCGCGAGA AGCAAATGGC GGGCTCCATG AGTGGCGGGC AAAAGCAGCG TTTAGCCTTA GCCGCCGCGA CCTTGCATCA CCCCGAGCTG TTATTTCTCG ATGAGCCGAC GTCGGCGGTG GACCCTGAAA ATCGCCGCGA GTTTTGGGAA CGGCTGTTCG ATCTCTGTGC CCAAGGCACC ACGATTTTAG TCTCGACCCA CTATATGGAT GAGGCCGAGC GTTGCCATGG TCTGGCGATT TTAGAGCGTG GGATAAAACG CGCCGACGGT TCGCCGCAAC AACTCATGGC GGCCATGGGT GCGCGGGTCA TTGAAGTGTC GGGGGAGGAT TTACGCAAGC TTAAACAATC ACTGATAAGC GACGCCAACG TGTTATCGGC AGCGCAGATT GGCAGTCGTT TACGGGTGTT AGTGCAAAGT TCGATTGCAG ATCCGCTGGC TTGGTTAAGT CCAAGGGTTG CGGGGCGGGC GCTGACCGAG GTGCGCCCAA GCCTTGAGGA TGTGTTTGTG ACTTGCACGG GCGGACGTGC CCAGCTAATG CCGCCAAACG GCAGTCAGGC CACGACAGTG GAGGCTCAAG ATGCTACGTA G
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Protein sequence | MSAQQASAGG SDAGTSAAET SSAASEFAIE TRGMTRAFGG INAVEDLDLA IPKGTIYGFL GPNGCGKSTS IRMLTGLLSP TSGDIRVLGE TLPGAEEKLR RRIGYMTQKF SLYDNLSVRE NLEFVAQIYG LNRRQTKARL AELLSLYDLA GREKQMAGSM SGGQKQRLAL AAATLHHPEL LFLDEPTSAV DPENRREFWE RLFDLCAQGT TILVSTHYMD EAERCHGLAI LERGIKRADG SPQQLMAAMG ARVIEVSGED LRKLKQSLIS DANVLSAAQI GSRLRVLVQS SIADPLAWLS PRVAGRALTE VRPSLEDVFV TCTGGRAQLM PPNGSQATTV EAQDAT
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