Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2640 |
Symbol | |
ID | 4255474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3119112 |
End bp | 3120233 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638123318 |
Product | ABC-2 type transporter |
Protein accession | YP_738682 |
Protein GI | 114048132 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTACGTA GAATTTGGGC CGTGGTGGTC AAAGAACTCA GGCAGCTATC GCGGGATCGC ATGACCTTCG GCATGATAGT CATGATCCCC TTAGTGCAGT TGATGCTGTT TGGCTATGCC ATCAATACCG ATGCGCGCCA TTTGCCCGCA GGTTTAGTGA ATTTAAGCGA CTCTGCCTAT AGCCGCGCCT TGGTCAAGGC GGTAGAAGCG ACCCAAGTGG TTGATTTTAA GCATCGCTAT CTGAGCGCCG CCGAGGCGGA TGCGGCCATC ACTCGGGGCG AAGTAAAAGC CGTGCTGTAT TTAGGCGCCG ATCTCGACGA GCGTTTAGTG CGACATCCCG CCTTTGCGGG ACAGGCCTAT TTTGCCGAGC CCGTGGGGCA ATGGTTGGTG GATGGCTCGG ATACTGTGGT CGCTTCTACC ATTCGCAGTT TAAGGCAAAT GCCACTGGAT GAAATTGCGG GCAGGGCGGT TAAATCGAAT CCCCCCAGTT TTGAGGTGGT GCAGTATTTT AACCCTGAGC AGCGTTCTGT GGTGAATATC GTCCCCGGCC TCTTAGGGGT CATTTTGACT ATGACCATGG TGATGTTTAC CTCGGCCGCG ATTGTGCGCG AGCGAGAGCA GGGCAATATG GAGTTTTTAA TCACCACGCC GGTGAGGCCG CTGGAGCTAA TGCTTGGGAA AATCACCCCT TATGTATTAG TGGGCTTTGT GCAATTGGCG ATTATTCTTA CCGCTGGGCA TTTACTGTTT GCCGTGCCGA TCCGCGGCGG TTTGGATTCG ATTGCGCTGG CGGCCATGCT GTTTATCTGC GCCAGTTTGA CCTTAGGCCT AGTGATTTCG ACCATAGCGA AAACCCAGTT ACAGTCGATG CAGATGACGG TGTTTATCCT GCTGCCGTCG ATTCTGTTGT CGGGTTTTAT GTTCCCCTAC GAGGCCATGC CCGTGGCGGC GCAGTGGATT GCCGAGGCGT TACCTGCGAC GCACTTTATG CGCATGTCCC GCGCGATTGT GCTGAGGGAT GCCGAGGTGA GTGACTTGCA ATTTGATGCC TTGTGGATGA TTGGCTTCAC CTGCCTAGGG CTGCTGGTGG CAAGCCTGCG ATTCTCTAAA CGTTTGGATT AA
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Protein sequence | MLRRIWAVVV KELRQLSRDR MTFGMIVMIP LVQLMLFGYA INTDARHLPA GLVNLSDSAY SRALVKAVEA TQVVDFKHRY LSAAEADAAI TRGEVKAVLY LGADLDERLV RHPAFAGQAY FAEPVGQWLV DGSDTVVAST IRSLRQMPLD EIAGRAVKSN PPSFEVVQYF NPEQRSVVNI VPGLLGVILT MTMVMFTSAA IVREREQGNM EFLITTPVRP LELMLGKITP YVLVGFVQLA IILTAGHLLF AVPIRGGLDS IALAAMLFIC ASLTLGLVIS TIAKTQLQSM QMTVFILLPS ILLSGFMFPY EAMPVAAQWI AEALPATHFM RMSRAIVLRD AEVSDLQFDA LWMIGFTCLG LLVASLRFSK RLD
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