Gene Shewmr7_2620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2620 
Symbol 
ID4255227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3098028 
End bp3098633 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content47% 
IMG OID638123298 
Producthypothetical protein 
Protein accessionYP_738662 
Protein GI114048112 
COG category[S] Function unknown 
COG ID[COG2928] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000120767 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA CCTTAGCCCG TGGTTTGATG AACCTGCTGC CGATGGCGTT AAGCCTGTGG 
TTGTTTTGGT CATTGTTTGT ATCGTTAGAT GGTTTAGGGA TTTTTATTTT AGAGTTGGTA
GGGATTAACC AACATTTTGT CGGCGCGGGC TTTATCTTAG TCGTGGCCAT AGTGTTTGCG
GTGGGCCTGT TGTTTTCGGT AAGTCCTATT GTGTGGCTCT ATGGCTGGAT TGAACGTCAG
CTAATGCGTT TTCCGCTGTT TAAATCTGTT TATGGCAGTA TTCGTGATAT CGCTTCCTTA
ATGAACCGTG AGGGTAAACC CAATACTCAG CAAACCGTGT TGGTTAAACA GGCCAATGGC
GGGTTTGTGG TGGGCTTTAT TATGACGGAT ACACCGCCGC AACCATTGCT CGATGCCTTA
CCCGAAGGGG ATTGGGTGCC TGTGTTATTC CAACTCAGTT ACCAAATGGC GGGGGTGACT
AGCCTAGTCA AACGTGAAGA TTTGATTTTA GTGGACTGGT CTTTTGAAGA GGCGATGCGC
TTCAATTTAA CGGCGGGGAT TTCGCAAACG CCGAGCGCGG CAACGGTAAA AGCCAAAGCC
GAATAA
 
Protein sequence
MKKTLARGLM NLLPMALSLW LFWSLFVSLD GLGIFILELV GINQHFVGAG FILVVAIVFA 
VGLLFSVSPI VWLYGWIERQ LMRFPLFKSV YGSIRDIASL MNREGKPNTQ QTVLVKQANG
GFVVGFIMTD TPPQPLLDAL PEGDWVPVLF QLSYQMAGVT SLVKREDLIL VDWSFEEAMR
FNLTAGISQT PSAATVKAKA E