Gene Shewmr7_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2615 
Symbol 
ID4255222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3091737 
End bp3092786 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content52% 
IMG OID638123293 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_738657 
Protein GI114048107 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATT CCCGCGTATT TATTAATAGC CTTGCCTATG AACTGGCACC TGTGGTGGTT 
TCCAGTAGCG AGCTAGAATC TCGCCTCGCG CCTCTATATC AAAAGTTTCG CATTCCTATG
GGGCAACTTG CGGCATTAAC GGGCATTACC GAACGCCGTT GGTGGCCTAA AGGGCATCAA
TTATCCGATG GAGCGATTAA AGCGGCGCAC AAGGCGATTG CAGAAACGGG AATAGAAGTC
GCCGAACTGG GCGCTGTGGT GTATACCGGC GTTTGTCGTG ACCAACACGA ACCCGCCACC
GCCTGCCGGA TTGCGGCGGC ATTAGGTGTG TCGAAGGATA CGGCGATTTA CGATATCAGC
AATGCCTGTC TTGGGGTGTT ATCGGGCATT TTAGACATTG CTAACCGTAT TGAGCTTGGC
CAAATTAAGG CGGGCATGGT GGTGTCCTGC GAATCGGCGC GGGATATTGT CGATGTGACC
ATTGATAATA TGCTGGCCGA TCCGACCATG CAGAATTTTG CTCAGTCGCT GGCGACCTTA
ACCGGCGGCT CTGGCGCGGT GGCGGTGATC CTGACCGATG GCAGTTTGCC GCTGACGAAT
GTGCGTAAGC ATCAGCTACT TGGCGCCTCC CATTTATCTG CGCCGCAGCA CCATCAACTG
TGTCAGTGGG GCTTGCAGGA AGTGGGGCAC AATATTTACC GTGAGTTTAT GCGTACCGAT
GCGGTGACCT TGCTCAAAGA AGGGGTCGAG CTGGCGAAAC ATACGTGGGA GCATTTCCTG
ACCCAGCGTA ATTGGTTGGT CGAGCAGGTC GATAAAGTGA TCTGCCATCA GGTCGGCGCT
TCAAACCGTA AACAGGTCTT GAGTGCATTA AATATTCCGC CTGAAAAAGA ATTTCCAACA
TATCAACTGC TTGGCAATAT GGGCACAGTC TCTTTACCCG TCACTGCGGC CATGGCACAC
GATCAGGGTT TTTTACGCCC TGGGGATCAG GTGAGCTTTT TAGGCATCGG CAGTGGCTTA
AACTGCATGA TGCTGGGTAT TAAGTGGTAG
 
Protein sequence
MKYSRVFINS LAYELAPVVV SSSELESRLA PLYQKFRIPM GQLAALTGIT ERRWWPKGHQ 
LSDGAIKAAH KAIAETGIEV AELGAVVYTG VCRDQHEPAT ACRIAAALGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGMVVSC ESARDIVDVT IDNMLADPTM QNFAQSLATL
TGGSGAVAVI LTDGSLPLTN VRKHQLLGAS HLSAPQHHQL CQWGLQEVGH NIYREFMRTD
AVTLLKEGVE LAKHTWEHFL TQRNWLVEQV DKVICHQVGA SNRKQVLSAL NIPPEKEFPT
YQLLGNMGTV SLPVTAAMAH DQGFLRPGDQ VSFLGIGSGL NCMMLGIKW