| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2601 |
|---|
| Symbol | |
|---|
| ID | 4257483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3074349 |
|---|
| End bp | 3075635 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638123279 |
|---|
| Product | tagatose-bisphosphate aldolase noncatalytic subunit |
|---|
| Protein accession | YP_738643 |
|---|
| Protein GI | 114048093 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4573] Predicted tagatose 6-phosphate kinase |
|---|
| TIGRFAM ID | [TIGR02810] D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTGA TTCAAACTAT CATTGACGCC AATAAAGCAG GTCAGCAGGC GGGCATTTTC
GCCGTCTGCT CGGCCCAGCC CTTGGTGTTG CAGGCGGCGC TATTGCAGTC AAAGGCGAAT
GGCACGCCCT TACTTATCGA GGCGACCGCC AACCAAGTGA ATCAGTTTGG CGGTTATACC
GGGATGAAAC CACAGGATTT CATCGACTTC GTCACTCAAA TGGCTATTGA ACTTGGCCTT
GAACCTTCAC AATTACTCTT TGGCGGTGAC CACTTAGGCC CCGTTGTTTG GTGCCAGCAA
GCCGCCGAAG AGGCGATGCA ATTGGCGGAA GACCTTATCG CCGAATATGT TAAGGCGGGA
TTTACCAAAA TCCACCTCGA CACCAGTATG GCCTGCGTCG GTGATGTGCT TCCCTTAGCG
GATGAACTTA TCGCGGCGCG TGCGGCGCGG CTCTGTGCGG TGGCCGAAGC CCATCGTGCG
CCCGAGCAAG CGCTCTGTTA TGTGATAGGC ACCGAAGTGC CCGCGCCCGG CGGTGTGAGT
GAGATGGAGG CCGAACTTGA GGTCACGCCT GTCAGTGCCA TTGAACATAC CTTAAATTGC
CACCGCGATG CCTTTACTGC GGCAGGATTG GGTGAGGAGG TGTGGCAAAA GGTGATTGCG
GTTGTGGTTC AGCCTGGGGT GGAGTTTGAT AACAGCCAAG TGCATTTGTT CGAACCCGAG
GCAACCCATG CCCAAAGTGA GTTCATTCGC GGTTATCCCA GATTAGTGTT TGAGGCGCAT
TCGACCGATT ATCAGCTCAG CATGGGGTAT CAAGCCTTAG TGCAGCAGCA TTTCGCGATT
TTAAAAGTGG GCCCACAGCT TACTTTTGCT CTGCGGGAGG CTTTGTTTGC CCTGTCCCAT
ATCGAAAATG TGCTGTGCCA GCCCGAGCAA TGCTCGGATT TACGCCAAAG CTGTTTTGAG
TTAATGCGAG ATAACCCTAA GTATTGGCAA GGGTTTTATG CCGACAACGA GGCATTGAAG
TGGCAACTGG GCTTTAGCTT TAGTGACCGT GTGCGTTACT ACTGGCCGAG TCTGCAAAAC
AAGGTCGAGC AGCTATTGAG CAACTTAGCC CAAAGCATTC CTCTGCCGCT GATCAGCCAG
TATTTACCGA ACCAATATAC GGCGGTCTTG GCGGGGGAAC TTAAGCCCAC GGCCCGTGAA
CTCGTACTGC ATAAAATTAC CGAAGTATTG GCCGATTACG CCAATGCCTG CCAGCTTCCT
GTGATGCAAT CACCTTTAAA GGGATGA
|
|---|
| Protein sequence | MSVIQTIIDA NKAGQQAGIF AVCSAQPLVL QAALLQSKAN GTPLLIEATA NQVNQFGGYT
GMKPQDFIDF VTQMAIELGL EPSQLLFGGD HLGPVVWCQQ AAEEAMQLAE DLIAEYVKAG
FTKIHLDTSM ACVGDVLPLA DELIAARAAR LCAVAEAHRA PEQALCYVIG TEVPAPGGVS
EMEAELEVTP VSAIEHTLNC HRDAFTAAGL GEEVWQKVIA VVVQPGVEFD NSQVHLFEPE
ATHAQSEFIR GYPRLVFEAH STDYQLSMGY QALVQQHFAI LKVGPQLTFA LREALFALSH
IENVLCQPEQ CSDLRQSCFE LMRDNPKYWQ GFYADNEALK WQLGFSFSDR VRYYWPSLQN
KVEQLLSNLA QSIPLPLISQ YLPNQYTAVL AGELKPTARE LVLHKITEVL ADYANACQLP
VMQSPLKG
|
|---|
| |