Gene Shewmr7_2597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2597 
Symbol 
ID4257479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3069595 
End bp3070953 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content50% 
IMG OID638123275 
Productmajor facilitator transporter 
Protein accessionYP_738639 
Protein GI114048089 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR01272] glucose/galactose transporter 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.802084 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA CGTCCGACAG TACCCAAGCC ACGGCCTCAC CGCAGGGCAG TTTTATTCCT 
ATGTTATTGA TAGGGATTTT ATTTTTTGTC TTTGGCTTTG TGACTTGGCT CAATGGTGCC
TTGATCCCAT TTTTAAAAAT CGCCTGTCAG TTGAATGAGT TTGAAGCCTA TTTAGTCACC
TTTGTGTTTT ACATAGCTTA TTTTGTGATG GCGCTGCCGA CCTCATCCAT CCTCACGCGT
CTTGGCTATA AGATGGGCAT GACCTTAGGT TTAGGGATCA TGGCGGCAGG CGCGGGCTTG
TTTATTGTGG CGGCTTTGAT TGGCCATTTT ACGACCTTCC TCTTGGCGTT ATTTGTATTG
GGCACGGGCT TAACCTTGCT GCAAACGGCC GCCAATCCTT ACATTGTCTG TATTGGCCCA
AGGGAAAGTG CGGCAATGCG GATAAGTTTA ATGGGGATTG TGAATAAGGG CGCGGGCTTT
ATTGTGCCAA TTATCTTTAC TGCCTGGATT TTAACGGGCA TGGAACCCTA CAGTGAAACG
GCATTGGCCA GCTTGTCCGA AGCGCAGCGC GAATTGGCGT TAACGGAATT AGCCAATCGT
TTAGTACAGC CCTATTTAAT GATGATGTTT GTACTACTGG GATTGATGGC CTTTGTGTGG
TTTTCGCCGC TGCCAGAGCC CGAATTAGGT GAGCGAGTCG AGCGTACCCA AGCCGATTGG
AAGGCTATTC TACAGTATCC GCAGGTGATC TTAGGGGCTC TAACACTCTT CTGTTATGTG
GGCGCCGAGG TGATTGCTGG CGATAGCATA GGACTATTTA GTCAAGGACT CGGGGTTGCC
CACTTTGGCA TGATGACCTC CTACACCATG GGATTTATGG TACTTGGCTA TGTGCTTGGA
ATCGTGCTGA TCCCAAGATG GATCAGCCAG CAAACGGCAT TAGTGGGTTC GGCCGTCGCG
GGCTTGTTAT TTACCCTCGG GGTCTTGCTC AGCGACAGTC AAAGCCAAGG TTTGTCTGAG
CTGTTACTCG GTTGGTTAGG CGTATTACCC GTGCCCGATC CCGTGCTTTA CTTAGCCCTG
CTTGGGTTGG CAAACGCCTT GGTATGGCCT GCGGTGTGGC CATTAGCCCT TGAAGGACTC
GGGCGCTTAA CGGCCACGGC ATCGGCACTA TTGATCATGG GGATTGCGGG CGGTGCGATT
CTGCCACTGC TCTATGGCTA CATAGCCCAT AGCCAAGGCG ACAGCCAAAT GGCGTATTTC
TTACTGTTAC CTTGTTACGG CTTAATATTT TACTACGCCA TTTGGGGCCA TAAGTTAACG
GCCAAAGTGG CCTCTAGCAC TGCTATGGTT AATGAATAG
 
Protein sequence
MKFTSDSTQA TASPQGSFIP MLLIGILFFV FGFVTWLNGA LIPFLKIACQ LNEFEAYLVT 
FVFYIAYFVM ALPTSSILTR LGYKMGMTLG LGIMAAGAGL FIVAALIGHF TTFLLALFVL
GTGLTLLQTA ANPYIVCIGP RESAAMRISL MGIVNKGAGF IVPIIFTAWI LTGMEPYSET
ALASLSEAQR ELALTELANR LVQPYLMMMF VLLGLMAFVW FSPLPEPELG ERVERTQADW
KAILQYPQVI LGALTLFCYV GAEVIAGDSI GLFSQGLGVA HFGMMTSYTM GFMVLGYVLG
IVLIPRWISQ QTALVGSAVA GLLFTLGVLL SDSQSQGLSE LLLGWLGVLP VPDPVLYLAL
LGLANALVWP AVWPLALEGL GRLTATASAL LIMGIAGGAI LPLLYGYIAH SQGDSQMAYF
LLLPCYGLIF YYAIWGHKLT AKVASSTAMV NE