Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2597 |
Symbol | |
ID | 4257479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3069595 |
End bp | 3070953 |
Gene Length | 1359 bp |
Protein Length | 452 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123275 |
Product | major facilitator transporter |
Protein accession | YP_738639 |
Protein GI | 114048089 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | [TIGR01272] glucose/galactose transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.802084 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA CGTCCGACAG TACCCAAGCC ACGGCCTCAC CGCAGGGCAG TTTTATTCCT ATGTTATTGA TAGGGATTTT ATTTTTTGTC TTTGGCTTTG TGACTTGGCT CAATGGTGCC TTGATCCCAT TTTTAAAAAT CGCCTGTCAG TTGAATGAGT TTGAAGCCTA TTTAGTCACC TTTGTGTTTT ACATAGCTTA TTTTGTGATG GCGCTGCCGA CCTCATCCAT CCTCACGCGT CTTGGCTATA AGATGGGCAT GACCTTAGGT TTAGGGATCA TGGCGGCAGG CGCGGGCTTG TTTATTGTGG CGGCTTTGAT TGGCCATTTT ACGACCTTCC TCTTGGCGTT ATTTGTATTG GGCACGGGCT TAACCTTGCT GCAAACGGCC GCCAATCCTT ACATTGTCTG TATTGGCCCA AGGGAAAGTG CGGCAATGCG GATAAGTTTA ATGGGGATTG TGAATAAGGG CGCGGGCTTT ATTGTGCCAA TTATCTTTAC TGCCTGGATT TTAACGGGCA TGGAACCCTA CAGTGAAACG GCATTGGCCA GCTTGTCCGA AGCGCAGCGC GAATTGGCGT TAACGGAATT AGCCAATCGT TTAGTACAGC CCTATTTAAT GATGATGTTT GTACTACTGG GATTGATGGC CTTTGTGTGG TTTTCGCCGC TGCCAGAGCC CGAATTAGGT GAGCGAGTCG AGCGTACCCA AGCCGATTGG AAGGCTATTC TACAGTATCC GCAGGTGATC TTAGGGGCTC TAACACTCTT CTGTTATGTG GGCGCCGAGG TGATTGCTGG CGATAGCATA GGACTATTTA GTCAAGGACT CGGGGTTGCC CACTTTGGCA TGATGACCTC CTACACCATG GGATTTATGG TACTTGGCTA TGTGCTTGGA ATCGTGCTGA TCCCAAGATG GATCAGCCAG CAAACGGCAT TAGTGGGTTC GGCCGTCGCG GGCTTGTTAT TTACCCTCGG GGTCTTGCTC AGCGACAGTC AAAGCCAAGG TTTGTCTGAG CTGTTACTCG GTTGGTTAGG CGTATTACCC GTGCCCGATC CCGTGCTTTA CTTAGCCCTG CTTGGGTTGG CAAACGCCTT GGTATGGCCT GCGGTGTGGC CATTAGCCCT TGAAGGACTC GGGCGCTTAA CGGCCACGGC ATCGGCACTA TTGATCATGG GGATTGCGGG CGGTGCGATT CTGCCACTGC TCTATGGCTA CATAGCCCAT AGCCAAGGCG ACAGCCAAAT GGCGTATTTC TTACTGTTAC CTTGTTACGG CTTAATATTT TACTACGCCA TTTGGGGCCA TAAGTTAACG GCCAAAGTGG CCTCTAGCAC TGCTATGGTT AATGAATAG
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Protein sequence | MKFTSDSTQA TASPQGSFIP MLLIGILFFV FGFVTWLNGA LIPFLKIACQ LNEFEAYLVT FVFYIAYFVM ALPTSSILTR LGYKMGMTLG LGIMAAGAGL FIVAALIGHF TTFLLALFVL GTGLTLLQTA ANPYIVCIGP RESAAMRISL MGIVNKGAGF IVPIIFTAWI LTGMEPYSET ALASLSEAQR ELALTELANR LVQPYLMMMF VLLGLMAFVW FSPLPEPELG ERVERTQADW KAILQYPQVI LGALTLFCYV GAEVIAGDSI GLFSQGLGVA HFGMMTSYTM GFMVLGYVLG IVLIPRWISQ QTALVGSAVA GLLFTLGVLL SDSQSQGLSE LLLGWLGVLP VPDPVLYLAL LGLANALVWP AVWPLALEGL GRLTATASAL LIMGIAGGAI LPLLYGYIAH SQGDSQMAYF LLLPCYGLIF YYAIWGHKLT AKVASSTAMV NE
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