Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2587 |
Symbol | |
ID | 4256669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3060119 |
End bp | 3061264 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638123265 |
Product | glycerate kinase |
Protein accession | YP_738629 |
Protein GI | 114048079 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1929] Glycerate kinase |
TIGRFAM ID | [TIGR00045] glycerate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.692299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATAG TTATCGCCCC CGATTCCTTT AAAGAGAGCT TAAGCGCACT CGATGTGGCT AATGCGATCG AACAAGGCTT AACACAAGTG ATCCCAGACT GTGAGATTGT CAAAATCCCC GTCGCCGATG GCGGCGAAGG CACAGTGCAA TCTATGGTCG ATGCCACTGG CGGCAGCATT GTCAATTTAG AGGTCATGGG GCCACTCGGC CATAAAGTCA AAGCCCATTA CGGCATTTTA GGCCAGCAAG CCAAAGGCAC GATTGCGGTG ATTGAAATGG CCTCCGCCTC GGGTTTACAC CATGTACCAA GGGATCAGCG TAATCCGCTG CTCACTACCA GTTATGGTAC GGGCGAGCTG ATTTGTGATG CGCTCAATCG TGGGATAAAA CACATTATTT TAGGCTTAGG CGGCAGTGCA ACTAATGATG GCGGCGCAGG TATGGCCCAA GCACTGGATA TTTTACTGCT AGATAAACAA GGTAAAACCT TAAGTGCTGG CGGCGCGGCA CTTGCTCAGC TTGCCAGCAT CGATATGAGC CACGCCCATC CGCTACTGAA AGAATGCACC TTTGAAGTGG CCTGCGATGT CGATAATCCG CTGTGCGGCG AGCGTGGTGC TTCGGCCATA TTTGGCCCGC AAAAAGGCGC AACACCCGAG ATGGTGAGCA CCTTAGATGC AGCACTAAGT CACTATGCCG ATGTGATCGC CCAAAGCGGC GTCACCGATC ACCGCAATCA AGCTGGCGCG GGCGCGGCAG GCGGAATGGG ACTTGGCGTG ATGGCATTTT TAGGCGCCGA GCTTAAACCC GGTGTTGAGA TTGTGATGCA AACGGTAGGA CTGGCAGACA AAATTCGCGG CGCGGATCTT GTTATCACCG GCGAAGGCCG AATCGATGGC CAGACAATCT TTGGCAAAAC CCCGATGGGC GTATTAAAGC AAGCGCAGCT GCAAAATATT CCGACTATAG GAATTGCGGG TTGCCTTGGC GACAATGCTA ATGCCGTGCT CGAGCAAGGT ATGGCGGCGA TTTTCCCCAT CATTCCACAC TTAAGCCCAC TGGATGATGT GCTGGCGAAT GCCAAAACGA ATCTGACCAA TACCGCCCGT AATATTGGCG CCGTCTTGAT GCTGGGCAAG CGCTAA
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Protein sequence | MKIVIAPDSF KESLSALDVA NAIEQGLTQV IPDCEIVKIP VADGGEGTVQ SMVDATGGSI VNLEVMGPLG HKVKAHYGIL GQQAKGTIAV IEMASASGLH HVPRDQRNPL LTTSYGTGEL ICDALNRGIK HIILGLGGSA TNDGGAGMAQ ALDILLLDKQ GKTLSAGGAA LAQLASIDMS HAHPLLKECT FEVACDVDNP LCGERGASAI FGPQKGATPE MVSTLDAALS HYADVIAQSG VTDHRNQAGA GAAGGMGLGV MAFLGAELKP GVEIVMQTVG LADKIRGADL VITGEGRIDG QTIFGKTPMG VLKQAQLQNI PTIGIAGCLG DNANAVLEQG MAAIFPIIPH LSPLDDVLAN AKTNLTNTAR NIGAVLMLGK R
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