Gene Shewmr7_2587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2587 
Symbol 
ID4256669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3060119 
End bp3061264 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content53% 
IMG OID638123265 
Productglycerate kinase 
Protein accessionYP_738629 
Protein GI114048079 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1929] Glycerate kinase 
TIGRFAM ID[TIGR00045] glycerate kinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.692299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATAG TTATCGCCCC CGATTCCTTT AAAGAGAGCT TAAGCGCACT CGATGTGGCT 
AATGCGATCG AACAAGGCTT AACACAAGTG ATCCCAGACT GTGAGATTGT CAAAATCCCC
GTCGCCGATG GCGGCGAAGG CACAGTGCAA TCTATGGTCG ATGCCACTGG CGGCAGCATT
GTCAATTTAG AGGTCATGGG GCCACTCGGC CATAAAGTCA AAGCCCATTA CGGCATTTTA
GGCCAGCAAG CCAAAGGCAC GATTGCGGTG ATTGAAATGG CCTCCGCCTC GGGTTTACAC
CATGTACCAA GGGATCAGCG TAATCCGCTG CTCACTACCA GTTATGGTAC GGGCGAGCTG
ATTTGTGATG CGCTCAATCG TGGGATAAAA CACATTATTT TAGGCTTAGG CGGCAGTGCA
ACTAATGATG GCGGCGCAGG TATGGCCCAA GCACTGGATA TTTTACTGCT AGATAAACAA
GGTAAAACCT TAAGTGCTGG CGGCGCGGCA CTTGCTCAGC TTGCCAGCAT CGATATGAGC
CACGCCCATC CGCTACTGAA AGAATGCACC TTTGAAGTGG CCTGCGATGT CGATAATCCG
CTGTGCGGCG AGCGTGGTGC TTCGGCCATA TTTGGCCCGC AAAAAGGCGC AACACCCGAG
ATGGTGAGCA CCTTAGATGC AGCACTAAGT CACTATGCCG ATGTGATCGC CCAAAGCGGC
GTCACCGATC ACCGCAATCA AGCTGGCGCG GGCGCGGCAG GCGGAATGGG ACTTGGCGTG
ATGGCATTTT TAGGCGCCGA GCTTAAACCC GGTGTTGAGA TTGTGATGCA AACGGTAGGA
CTGGCAGACA AAATTCGCGG CGCGGATCTT GTTATCACCG GCGAAGGCCG AATCGATGGC
CAGACAATCT TTGGCAAAAC CCCGATGGGC GTATTAAAGC AAGCGCAGCT GCAAAATATT
CCGACTATAG GAATTGCGGG TTGCCTTGGC GACAATGCTA ATGCCGTGCT CGAGCAAGGT
ATGGCGGCGA TTTTCCCCAT CATTCCACAC TTAAGCCCAC TGGATGATGT GCTGGCGAAT
GCCAAAACGA ATCTGACCAA TACCGCCCGT AATATTGGCG CCGTCTTGAT GCTGGGCAAG
CGCTAA
 
Protein sequence
MKIVIAPDSF KESLSALDVA NAIEQGLTQV IPDCEIVKIP VADGGEGTVQ SMVDATGGSI 
VNLEVMGPLG HKVKAHYGIL GQQAKGTIAV IEMASASGLH HVPRDQRNPL LTTSYGTGEL
ICDALNRGIK HIILGLGGSA TNDGGAGMAQ ALDILLLDKQ GKTLSAGGAA LAQLASIDMS
HAHPLLKECT FEVACDVDNP LCGERGASAI FGPQKGATPE MVSTLDAALS HYADVIAQSG
VTDHRNQAGA GAAGGMGLGV MAFLGAELKP GVEIVMQTVG LADKIRGADL VITGEGRIDG
QTIFGKTPMG VLKQAQLQNI PTIGIAGCLG DNANAVLEQG MAAIFPIIPH LSPLDDVLAN
AKTNLTNTAR NIGAVLMLGK R