Gene Shewmr7_2583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2583 
Symbol 
ID4256665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3054217 
End bp3055719 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content50% 
IMG OID638123261 
Productvibriolysin 
Protein accessionYP_738625 
Protein GI114048075 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.940274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0253074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCT ATCTCTTACC TTCTGTACTG AGTATGTGCG TAGCGGCAAG TCTTCAGGCG 
CAGGCCGTTG AGTTCAACGT TAATCACGGG CAATCCCTCT CGGCAGCGGC AGGGTTGAGC
CAAAAACACA GCTTTAAAGA GGTCAAAACG GTAACGCTCA ATAAAGGTCA AAGCAAAACG
AAAGCGTTGC AGTATTTCGA TGGTGTGCTG GTGTATGGCC ATCATCTGGT TGTGAGCACG
GATGATACAG AACAAAGCGC CATGGGGGAT GTGGCACAAA TTGCGGATGA TTTTTCGGTA
GCGGCAGGGA TTTCTCAAGG GCAGGCGATT GCGGCGTTGA ATCGGTTATA TCCAGGTTCG
GCGGCAACCG GTAAAAAGGA TGTTCAACTG GTGATCTTAA TGACCGAGGA TACTCCGAGG
TTAGTGTATC GGGTGTCTTA CTTAAGCGAC CAAACCGATG CGTTATCTCG GCCAACGGGT
TTTGTCGATG CGCAAACTGG CGAGGTGCTT GAGCATTGGA ATGAGATCAT GACCGCCAAG
AATAACGTGG GTAAACCCGG TAGTGGTGGA GGCGGTTCGG GTGGCAGCAG TACTCCCTTT
GATGCAATAG GTCCAGGTGG CAATACCAAA ATCGGTGGTT ACTACTACGG CAGTGATTAC
GGTGTTCTTA AGGTGAGTGA GTCTAATGAT GTATGCACTA TGACCAACGC CAATGTGAAA
ACCGTAAATA TGGCAAACTC GACTCGCCGT GGCTCTGTGT TCACCTTTAC TTGTCCGGAG
AATACTTATC AGATGGTCAA TGGCGCTTAT TCGCCATTAA ATGATGCGCA CTATTTCGGT
GGCGTTATTT TTAATATGTA TAAGGATTGG TACAACACCG CACCGTTAGC GTTTCAGTTA
GAGATGCGGG TGCATTATGG TCGTAACTAT GAAAATGCCT TCTGGGACGG CTCTGCTATG
TCCTTTGGTG ATGGTGCGAG TTACTTCTAT CCTCTCGTGA GTTTGGATGT TTCCGCCCAT
GAAGTGAGCC ACGGCTTTAC CGAGCAGAAC TCGGGCTTAA ATTACAGCGG CCAGTCCGGC
GGCATTAATG AAGCGTTCTC GGATATTGCC GGTGAGGCGG CCGAGTTCTA CATGCGTGGC
AGTAACGACT GGAAAGTGGG CTACGACATA GTTAAAGGCA GTGGTGCACT GCGTTATATG
GATAATCCGC CTAAGGATGG ACGCTCAATC GACAATGCCG CCAATTACAC TAGTTCCATG
GATGTGCATT ATTCCTCTGG GGTGTTTAAC AAAGCTTTTT ACACACTGGC GACCAAGAGT
GGTTGGAATA CCCGCAAGGC GTTCGATGTG TTTGTGTTAG CGAACCAGAT GTATTGGACA
CCAACCTCGA CCTTTAACCA AGCGGCCTGT GGTGTGCAGC AGGCGGCGAG TGCCAAAGGT
TCTGCCTATC CAGTGGCGGA TGTGACTGCG GCATTTGCCG TGGTGGGCGT GAGTTGCCAG
TGA
 
Protein sequence
MKVYLLPSVL SMCVAASLQA QAVEFNVNHG QSLSAAAGLS QKHSFKEVKT VTLNKGQSKT 
KALQYFDGVL VYGHHLVVST DDTEQSAMGD VAQIADDFSV AAGISQGQAI AALNRLYPGS
AATGKKDVQL VILMTEDTPR LVYRVSYLSD QTDALSRPTG FVDAQTGEVL EHWNEIMTAK
NNVGKPGSGG GGSGGSSTPF DAIGPGGNTK IGGYYYGSDY GVLKVSESND VCTMTNANVK
TVNMANSTRR GSVFTFTCPE NTYQMVNGAY SPLNDAHYFG GVIFNMYKDW YNTAPLAFQL
EMRVHYGRNY ENAFWDGSAM SFGDGASYFY PLVSLDVSAH EVSHGFTEQN SGLNYSGQSG
GINEAFSDIA GEAAEFYMRG SNDWKVGYDI VKGSGALRYM DNPPKDGRSI DNAANYTSSM
DVHYSSGVFN KAFYTLATKS GWNTRKAFDV FVLANQMYWT PTSTFNQAAC GVQQAASAKG
SAYPVADVTA AFAVVGVSCQ