Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2583 |
Symbol | |
ID | 4256665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 3054217 |
End bp | 3055719 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123261 |
Product | vibriolysin |
Protein accession | YP_738625 |
Protein GI | 114048075 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3227] Zinc metalloprotease (elastase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.940274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0253074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTCT ATCTCTTACC TTCTGTACTG AGTATGTGCG TAGCGGCAAG TCTTCAGGCG CAGGCCGTTG AGTTCAACGT TAATCACGGG CAATCCCTCT CGGCAGCGGC AGGGTTGAGC CAAAAACACA GCTTTAAAGA GGTCAAAACG GTAACGCTCA ATAAAGGTCA AAGCAAAACG AAAGCGTTGC AGTATTTCGA TGGTGTGCTG GTGTATGGCC ATCATCTGGT TGTGAGCACG GATGATACAG AACAAAGCGC CATGGGGGAT GTGGCACAAA TTGCGGATGA TTTTTCGGTA GCGGCAGGGA TTTCTCAAGG GCAGGCGATT GCGGCGTTGA ATCGGTTATA TCCAGGTTCG GCGGCAACCG GTAAAAAGGA TGTTCAACTG GTGATCTTAA TGACCGAGGA TACTCCGAGG TTAGTGTATC GGGTGTCTTA CTTAAGCGAC CAAACCGATG CGTTATCTCG GCCAACGGGT TTTGTCGATG CGCAAACTGG CGAGGTGCTT GAGCATTGGA ATGAGATCAT GACCGCCAAG AATAACGTGG GTAAACCCGG TAGTGGTGGA GGCGGTTCGG GTGGCAGCAG TACTCCCTTT GATGCAATAG GTCCAGGTGG CAATACCAAA ATCGGTGGTT ACTACTACGG CAGTGATTAC GGTGTTCTTA AGGTGAGTGA GTCTAATGAT GTATGCACTA TGACCAACGC CAATGTGAAA ACCGTAAATA TGGCAAACTC GACTCGCCGT GGCTCTGTGT TCACCTTTAC TTGTCCGGAG AATACTTATC AGATGGTCAA TGGCGCTTAT TCGCCATTAA ATGATGCGCA CTATTTCGGT GGCGTTATTT TTAATATGTA TAAGGATTGG TACAACACCG CACCGTTAGC GTTTCAGTTA GAGATGCGGG TGCATTATGG TCGTAACTAT GAAAATGCCT TCTGGGACGG CTCTGCTATG TCCTTTGGTG ATGGTGCGAG TTACTTCTAT CCTCTCGTGA GTTTGGATGT TTCCGCCCAT GAAGTGAGCC ACGGCTTTAC CGAGCAGAAC TCGGGCTTAA ATTACAGCGG CCAGTCCGGC GGCATTAATG AAGCGTTCTC GGATATTGCC GGTGAGGCGG CCGAGTTCTA CATGCGTGGC AGTAACGACT GGAAAGTGGG CTACGACATA GTTAAAGGCA GTGGTGCACT GCGTTATATG GATAATCCGC CTAAGGATGG ACGCTCAATC GACAATGCCG CCAATTACAC TAGTTCCATG GATGTGCATT ATTCCTCTGG GGTGTTTAAC AAAGCTTTTT ACACACTGGC GACCAAGAGT GGTTGGAATA CCCGCAAGGC GTTCGATGTG TTTGTGTTAG CGAACCAGAT GTATTGGACA CCAACCTCGA CCTTTAACCA AGCGGCCTGT GGTGTGCAGC AGGCGGCGAG TGCCAAAGGT TCTGCCTATC CAGTGGCGGA TGTGACTGCG GCATTTGCCG TGGTGGGCGT GAGTTGCCAG TGA
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Protein sequence | MKVYLLPSVL SMCVAASLQA QAVEFNVNHG QSLSAAAGLS QKHSFKEVKT VTLNKGQSKT KALQYFDGVL VYGHHLVVST DDTEQSAMGD VAQIADDFSV AAGISQGQAI AALNRLYPGS AATGKKDVQL VILMTEDTPR LVYRVSYLSD QTDALSRPTG FVDAQTGEVL EHWNEIMTAK NNVGKPGSGG GGSGGSSTPF DAIGPGGNTK IGGYYYGSDY GVLKVSESND VCTMTNANVK TVNMANSTRR GSVFTFTCPE NTYQMVNGAY SPLNDAHYFG GVIFNMYKDW YNTAPLAFQL EMRVHYGRNY ENAFWDGSAM SFGDGASYFY PLVSLDVSAH EVSHGFTEQN SGLNYSGQSG GINEAFSDIA GEAAEFYMRG SNDWKVGYDI VKGSGALRYM DNPPKDGRSI DNAANYTSSM DVHYSSGVFN KAFYTLATKS GWNTRKAFDV FVLANQMYWT PTSTFNQAAC GVQQAASAKG SAYPVADVTA AFAVVGVSCQ
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