| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2580 |
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| Symbol | |
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| ID | 4256662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3050435 |
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| End bp | 3052522 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123258 |
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| Product | outer membrane protein precursor MtrB |
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| Protein accession | YP_738622 |
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| Protein GI | 114048072 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0892811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0284758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AACTCAATTT GATCACTCTA GCGTTATTAG CCAACACCGG CTTAGCCGTA
GCTGCCGATG GTTATGGCCT CGCCAATGCC AATACCGACA AAGTGAAATT CGCTGCATGG
AGCTGTAAAG GCTGCGTGGT TGAAACGGGC GTATCTGGCA CTGTCGGTGT CGGCGTAGGT
TACAATGGCG AAGAGGACAT TCGCTCTGCC AATGCCTTTG GCTCTAAAAA CGAAGTTGCG
GGCAAGTTCG ATGCGGACCT TGCCTACCGT GGTGAAAAAG GTTACCGCGC CAGTGTTGAA
GCCTATCAAC TGGGAATGGA CGGCGGACGT TTAGATGTAA ATGCGGGCAA ACAAGGCCAG
TACAATATCA ATCTGAACTA CCGTCAAATT GCCACCTACG ATAGCAATAG TGCCCTCTCG
CCCTATTCTG GTATCGGCGG CAATAACCTG ACCTTGCCCG ATAACTGGGT CACCGCAGGT
TCAAGCAGCC AAATGCCACT GTTGATGGAC AGCCTCAACA GCCTCGAGTT ATCACTGAAA
CGTGAACGCG CGGGCCTTGG GTTCGAATAT CAGGGTGAAT CGCTGTGGAG CACCTATGTG
AACTACATGC GTGAAGAAAA AACCGGTTTA AAACAAACCT CTGGTAGCTT CTTCAACCAA
TCTATGATGT TGGCAGAACC AGTGGATTAC ACCACTGACA CCATAGAAGC GGGCGTGAAA
CTCAAAGGCG ATCGTTGGTT CACCGCGCTC AGCTACAATG GTTCTATTTT CAAGAATGAA
TACAACCAGC TGAACTTTGA CAGTGCCTTC AACCCCACCT TTGGTGCACA AACGACTGGT
GCCATTGCAC TCGATCCCGA TAACCAGTCA CACACAGTGT CGCTGATGGG TCAGTATAAC
GATGGCAGTA ACTCACTGTC TGGCCGTATT TTAACCGGAC AAATGAGCCA AGATCAGTCA
CTGGTGACCT CTGGTTACGG TTATCAACTG CCAACGGATG CAGTAGACGC CAAAGTCGAC
CTGCTGGGCA TGAACCTCAA AGTCGTGAGC AAGGTCAGCA ACTCTCTTCG CTTGACCGGT
AGTTACGATT ATTACGACCG TGACAACAAT ACCCCAATCG AAGAGTGGAC TCAGATCAGT
ATCAACAATG TCAGCGGTAA GGTGGCCTAT AACACCCCTT ACGATAACCG CACACAGCGC
TTTAAAGTGG CGGCGGATTA TCGTATTACC CACGGCATTA AGCTCGATGG TGGTTATGAC
TTCAAGCGTG ACGAACGTGA GTATCAAGAC CGTGAAAGCA CGGATGAGAA CACCGTTTGG
GCCCGTTTGC GCGTCAATAG CTTCGACATG TGGGACATGT GGGTAAAAGG CAGTTACGGC
AACCGTGACG GCTCACAATA CCAAGCGTCT GAATGGACGT CTTCTGAAAC CAACAGCCTG
TTACGTAAGT ACAATCTGGC AGACCGTGAC AGAACCCAAA TCGAAGCACG CATCACCCAT
ACTCCACTCG AAAGTCTGAC CATAGACTTC GGTGCCCGTT ATGCGCTGGA TGATTATACC
GATACTGTGA TTGGCTTAAC TGAGTCAAAA GACACCAGTT ACGATGCCAA TATCAGCTAT
ATGATCACCG CAGACTTACT GGCAACGGCC TTCTACAACC ACCAAACCAT AGAGTCAGAA
CAAGCGGGTA GCAGCAATTA CAGCACCCCA ACCTGGACTG GCTTTATTGA AGACAAAGTG
GATGTGGTTG GCGCTGGCAT CAGCTACAAC AATCTGCTGG AGAACAAGTT ACGCCTAGGT
CTGGATTACA CTTACTCAGA CTCCGACAGT AACACTCAAG TCAGACAAGG TATCACCGGC
GACTATGGCG ACTATTTTGC CAAAGTCCAT AACATTAACT TATACGCTCA ATATCAAGCG
ACCGAGAAAC TCGCGCTACG CTTCGATTAC AAAATTGAGA ACTATAAGGA CAATGACGCC
GCTAACGATA TCGCCGTTGA TGGCATTTGG AACGTCGTAG GCTTTGGCAG CAACAGCCAT
GACTACACTG CACAAATGCT GATGCTGAGC ATGAGTTACA AGCTCTAA
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| Protein sequence | MKFKLNLITL ALLANTGLAV AADGYGLANA NTDKVKFAAW SCKGCVVETG VSGTVGVGVG
YNGEEDIRSA NAFGSKNEVA GKFDADLAYR GEKGYRASVE AYQLGMDGGR LDVNAGKQGQ
YNINLNYRQI ATYDSNSALS PYSGIGGNNL TLPDNWVTAG SSSQMPLLMD SLNSLELSLK
RERAGLGFEY QGESLWSTYV NYMREEKTGL KQTSGSFFNQ SMMLAEPVDY TTDTIEAGVK
LKGDRWFTAL SYNGSIFKNE YNQLNFDSAF NPTFGAQTTG AIALDPDNQS HTVSLMGQYN
DGSNSLSGRI LTGQMSQDQS LVTSGYGYQL PTDAVDAKVD LLGMNLKVVS KVSNSLRLTG
SYDYYDRDNN TPIEEWTQIS INNVSGKVAY NTPYDNRTQR FKVAADYRIT HGIKLDGGYD
FKRDEREYQD RESTDENTVW ARLRVNSFDM WDMWVKGSYG NRDGSQYQAS EWTSSETNSL
LRKYNLADRD RTQIEARITH TPLESLTIDF GARYALDDYT DTVIGLTESK DTSYDANISY
MITADLLATA FYNHQTIESE QAGSSNYSTP TWTGFIEDKV DVVGAGISYN NLLENKLRLG
LDYTYSDSDS NTQVRQGITG DYGDYFAKVH NINLYAQYQA TEKLALRFDY KIENYKDNDA
ANDIAVDGIW NVVGFGSNSH DYTAQMLMLS MSYKL
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