| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2572 |
|---|
| Symbol | |
|---|
| ID | 4257525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3036613 |
|---|
| End bp | 3038907 |
|---|
| Gene Length | 2295 bp |
|---|
| Protein Length | 764 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638123250 |
|---|
| Product | ferrous iron transport protein B |
|---|
| Protein accession | YP_738614 |
|---|
| Protein GI | 114048064 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.148151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0102392 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGC AGTTTCATTG CGTCACTGTT GGTAACCCCA ACGCGGGAAA ATCAACACTC
TTTAACGCGC TAACCGGCGC GAATCAGCAA GTGGGCAACT GGTCCGGTGT GACCGTTGAG
AAAAAAACCG GTCATTTTAC CCTTAATGGC GCCGACGTTT ACTTAACCGA CTTACCCGGT
ATTTACGATT TACTTCCCGC GGGTAATAGT TGTGATTGTT CCCTCGATGA GCAGATTGCT
CAGCAATACC TCGCCGAACA ACGTGTCGAT GGCATCATCA ACTTAGTCGA TGCGACCAAT
ATCGAGCGCC ACCTCTATTT GACGGCACAA CTACGTGAGC TGTCGATCCC TATGGTGGTG
GTATTGAATA AAATCGATGC GGCTATTAAG CGTGGGATCC GTGTCGATTT AAAGAAAATG
AGCCAAGAGT TAGGTTGCCC TGTCATTGGC GTGTGCTCTC GCGATCCCGC CGATGTGGCT
AAAGTGCAAG CGCAGGTTTT GGACTTACTC CAAGGCCGCG TATCCGAAGC GCCTCTGCTA
CTCGATTACG ACGAGCAAAT TGAAGCGGGC GTGCAACTCC TTTGCAGTAA AGACCCCAAC
TTAAGCCGTG GCCGCGCTTT AGCGATGCTG GGTAACGGTT CTGGTTGTGG CAGCTGCAAA
AATGCCGAGC TACAGGATGA AGTCAGCACT TGCACCGAGC AAATTGCGCA GCAAGGGCAT
GACATCGAAG TGATGGTCGC TACCACGCGT TTTAACTTTG TTGAACGTGT GTTCCAAGGT
TCCGTTAAGA CCGATGGTTT CCTCACGCTG AGCGATAAAC TCGATAAATT AGTGTTACAT
CCTGTGCTTG GCATTCCGGT GTTCTTATTT GTCATGTATC TGATGTTTAT GTTCAGCATT
AACATCGGTA GTGCGTTTAT AGATTTCTTC GATGTGTTTG TCGGGGCTTT GCTGGTCGAT
CATTTTGGTG CATTCCTTGG CAATATGGGC GCGCCAGCAT GGTTGGTGAC GATTCTCGCG
GGTGGTGTCG GTCAAGGTAT TCAAACCGTT TCTACTTTTA TTCCGGTTAT CGCAGCGCTA
TTTCTCGGTT TATCTATCCT TGAAAGCTCA GGCTATATGG CCCGCGCGGC CTTCGTGGTG
GATGGCTTAA TGCGCCGTAT AGGCCTACCG GGTAAAGCGT TCGTGCCTAT GATTGTTGGC
TTTGGTTGTT CGGTGCCAGC GATTATGGCA ACACGTACTT TAGGCAGTGA GCGTGAGCGT
ATCGTGACAG GTATGATGGC GCCTTTTATG TCCTGCGGTG CACGTTTACC TGTGTATGCG
TTATTTGCGG CGGCGTTCTT CCCTGACTCT GGTCAAAACC TGGTGTTTTT ACTGTACGTG
ATTGGGATTT TTGCGGCGAT TGGTACTGGG TTATTACTGC GTAATACCTT ATTACCTGGC
ACAAGCAGTG CGGTGGTGAT GGAGCTGCCA AGCTATGAAA TGCCAAAGCT GAAGGCTGTG
ATGGTCCGTA CAGGTAAGCG AACTAAGAGC TTTATCTTAG GTGCGGGTAA AACCATCGTG
CTTGTGGTGA CACTGCTTAA CTTTATCAAC GCGATTGGCG TCGATGGCAC CTTCGGCCAT
GAAGATAGCC AAGCCTCACT TTTGAGTGTG GCGAGCCAAA AAGTGACACC CATCTTCGCG
CCAATGGGGA TTGAGCAAGA TAACTGGCCA GCGACCGTGG GGATCATCAC TGGTATTTTC
GCTAAAGAAG CCGTGGTTGG AACTCTCAAT AGCTTATATA CCAATGCGGC TCCTGAGGAT
GGTGAATTAA CCCCCTTAGC CGATAGTTTC AATGAAGCGC TGGCGACTAT CCCTGCAAAC
TTGTTCGGTT TAGATTTGGA AGATCCGCTT AAGTTATCTG TGGGTGATGT GTCCAGCACC
GACGTTGCCG CAGAGGCGCA AGGTGTAGCA ACGTCAACCT TTAGTGCGTT ACAGTCAGGC
TTTACCACTA CGGTGGCTGC GTTCTCTTAT CTGCTGTTTA TCTTACTCTA TACGCCGTGT
GTTGCTGCTA TGGGTGCCTT GGTACATGAG TTTGGCAGCC GCTGGGCAAC GTTTGCGGCA
ACTTGGACAT TCTCACTGGC CTACGGCAGT GCAACTATTG CCTATCAAGC GGCGACCTTT
AGCGCGCATC CGGTGCAATC GAGTTTGTGG ATTGGTTTCT TCCTCGTTGC TCTTGTGGTG
TTCTATCTGT GGCTTAAACG TAAAGGGCGC AGAACCCAAC AGATCATCCC TGGCATTAGG
ATTATTACCG AGTAA
|
|---|
| Protein sequence | MTKQFHCVTV GNPNAGKSTL FNALTGANQQ VGNWSGVTVE KKTGHFTLNG ADVYLTDLPG
IYDLLPAGNS CDCSLDEQIA QQYLAEQRVD GIINLVDATN IERHLYLTAQ LRELSIPMVV
VLNKIDAAIK RGIRVDLKKM SQELGCPVIG VCSRDPADVA KVQAQVLDLL QGRVSEAPLL
LDYDEQIEAG VQLLCSKDPN LSRGRALAML GNGSGCGSCK NAELQDEVST CTEQIAQQGH
DIEVMVATTR FNFVERVFQG SVKTDGFLTL SDKLDKLVLH PVLGIPVFLF VMYLMFMFSI
NIGSAFIDFF DVFVGALLVD HFGAFLGNMG APAWLVTILA GGVGQGIQTV STFIPVIAAL
FLGLSILESS GYMARAAFVV DGLMRRIGLP GKAFVPMIVG FGCSVPAIMA TRTLGSERER
IVTGMMAPFM SCGARLPVYA LFAAAFFPDS GQNLVFLLYV IGIFAAIGTG LLLRNTLLPG
TSSAVVMELP SYEMPKLKAV MVRTGKRTKS FILGAGKTIV LVVTLLNFIN AIGVDGTFGH
EDSQASLLSV ASQKVTPIFA PMGIEQDNWP ATVGIITGIF AKEAVVGTLN SLYTNAAPED
GELTPLADSF NEALATIPAN LFGLDLEDPL KLSVGDVSST DVAAEAQGVA TSTFSALQSG
FTTTVAAFSY LLFILLYTPC VAAMGALVHE FGSRWATFAA TWTFSLAYGS ATIAYQAATF
SAHPVQSSLW IGFFLVALVV FYLWLKRKGR RTQQIIPGIR IITE
|
|---|
| |