Gene Shewmr7_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2568 
Symbol 
ID4257521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3032091 
End bp3032810 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content47% 
IMG OID638123246 
ProductUDP-2,3-diacylglucosamine hydrolase 
Protein accessionYP_738610 
Protein GI114048060 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00051853 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGACCT TATTTATTGG CGATCTGCAC TTAAGTGCCG ATCGCCTCGA TATCACCCAA 
GCCTTTAATC GTTTCCTCGA TACAGAACTT GATGATGCCG ATGCCCTCTA CATTCTGGGG
GATTTATTTG AGGTATGGGT CGGCGACGAT TTAGCAGCGC CTTTTGCCCT CGAATTAGCG
CGCAGGCTCA AGCAAATCTC CCAAAGATTG CCCATCTACT TTATTCACGG AAATCGTGAC
TTTATGTTAG GCAAACAATT TGCCGATGCT GCGGGTATGC AAATATTGCC CGAAGTCACT
TGCTTAGATC TCTATGGTGT TAACACTGTT ATCTTGCACG GCGATAGCAT GTGTACCTTA
GATAAAGCCT ACCAACGCTT TCGTAAATTA CGCAGTTTTG CCTTCGCCCG TTGGCTTTAT
AGCTGTTTGC CGAAGAGAAA ACGTCAAGCG ATTGCCGATA AGATCCGTAG CAATAGTCAG
AGCAGCAATC AACAAAAAAG CTATGTCATC ATGGATGTGG AACCAAGTGC GGTGGATGCG
TTATTTGCCC AGACCCACTG CAAACAGATG ATCCACGGTC ATACCCACAG ACCCGCCATC
CACAACTTCA CTAATGGCTG TAAACGTATT GTAGTCGGTG ATTGGTATGA GCAAGGCAGT
GTGTTGGTGG TTAGCGCCGA CGGCGTAGAT TTAAAAAGCC TGCCCTTTGA CGCCAGCTAA
 
Protein sequence
MRTLFIGDLH LSADRLDITQ AFNRFLDTEL DDADALYILG DLFEVWVGDD LAAPFALELA 
RRLKQISQRL PIYFIHGNRD FMLGKQFADA AGMQILPEVT CLDLYGVNTV ILHGDSMCTL
DKAYQRFRKL RSFAFARWLY SCLPKRKRQA IADKIRSNSQ SSNQQKSYVI MDVEPSAVDA
LFAQTHCKQM IHGHTHRPAI HNFTNGCKRI VVGDWYEQGS VLVVSADGVD LKSLPFDAS