| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2562 |
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| Symbol | clpX |
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| ID | 4257515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3024640 |
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| End bp | 3025920 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123237 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_738604 |
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| Protein GI | 114048054 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000572573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0629316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGACA ACAAAAATAA TGGTGACAGC GGTAAATTGC TGTACTGCTC TTTTTGCGGT
AAGAGCCAGC ATGAAGTCAG AAAACTGATT GCAGGCCCAT CAGTATACGT ATGCGACGAA
TGTGTCGAAT TATGTAACGA CATTATTCGT GAAGAGATTA AAGAAATCTC TCCTAAGCGT
GATAATGATA AATTGCCAAC GCCACATGAG TTGCGTGCGC ATTTAGACGA TTATGTGATT
GGTCAGGACA GAGCCAAGAA AGTGCTGTCT GTGGCTGTAT ACAATCACTA TAAGCGCCTG
AGAAATTCTT CCCCTAAAGA TGGCGTGGAA TTAGGCAAGA GTAACATTTT GCTGATTGGT
CCGACGGGCA GTGGTAAAAC GCTGCTGGCC GAAACGCTGG CGCGCTCATT GAATGTCCCA
TTTACTATGG CTGACGCCAC CACCTTAACT GAAGCGGGTT ATGTGGGTGA AGACGTTGAA
AACATCATTC AAAAGCTGCT GCAAAAGTGC GATTACGATG TTGAGAAGGC GCAACGCGGT
ATCGTCTATA TCGACGAAAT CGACAAGATC AGCCGTAAAT CAGATAACCC ATCGATTACC
CGTGACGTAT CGGGTGAAGG CGTGCAACAA GCGCTGCTGA AACTTATCGA AGGTACGGTT
GCCGCGGTTC CACCTCAAGG TGGTCGTAAG CATCCACAGC AAGAGTTCTT ACAGGTGGAT
ACCTCTAAGA TCCTGTTTAT CTGTGGTGGT GCATTTGCGG GTCTTGAAAA GGTGATTGAA
CAGCGTGCTC ACGTAGGTTC GGGTATCGGT TTTGGTGCGC AAGTTAAAGG CGAAAAAGAT
AAGGCAACAA TTTCTCAAAC CTTATCTCAA GTCGAACCCG AAGACTTAGT CAAATACGGC
TTGATCCCTG AGTTTATCGG CCGTCTGCCT GTTGTTGCGA CGCTAACCGA GCTGGACGAA
GAAGCGTTAG TGCAAATTCT GTCAGAGCCC AAAAACGCGC TGACTAAGCA ATACAACGCG
CTGTTTGAGA TGGAAGGTGT TGAGCTCGAA TTCCGCGAAG ATGCGCTCAA AGCGATTGCA
CATAAAGCCA TGTCGCGCAA AACCGGTGCC CGTGGTCTAC GTTCAATCGT AGAAGGTATC
TTACTCGATA CTATGTACGA CATTCCTTCA ATTGAGGGCG TTGTGAAGGC GGTTGTTGAT
GAATCTGTGG TGAATGGTGA ATCTGCACCT ATCCTGATTT ACGAGCGTAA CGACGCGCAA
GCGGCCTCTG GCGAGCAATA A
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| Protein sequence | MGDNKNNGDS GKLLYCSFCG KSQHEVRKLI AGPSVYVCDE CVELCNDIIR EEIKEISPKR
DNDKLPTPHE LRAHLDDYVI GQDRAKKVLS VAVYNHYKRL RNSSPKDGVE LGKSNILLIG
PTGSGKTLLA ETLARSLNVP FTMADATTLT EAGYVGEDVE NIIQKLLQKC DYDVEKAQRG
IVYIDEIDKI SRKSDNPSIT RDVSGEGVQQ ALLKLIEGTV AAVPPQGGRK HPQQEFLQVD
TSKILFICGG AFAGLEKVIE QRAHVGSGIG FGAQVKGEKD KATISQTLSQ VEPEDLVKYG
LIPEFIGRLP VVATLTELDE EALVQILSEP KNALTKQYNA LFEMEGVELE FREDALKAIA
HKAMSRKTGA RGLRSIVEGI LLDTMYDIPS IEGVVKAVVD ESVVNGESAP ILIYERNDAQ
AASGEQ
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