| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2554 |
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| Symbol | |
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| ID | 4257453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3015074 |
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| End bp | 3015964 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123229 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_738596 |
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| Protein GI | 114048046 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.162535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0684002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCAA TTAAAATTTA TCAGGAAGAT CAAATCGCCT CGCCCATGAT GCGGGTCTGG
CAGAATTTTT CGGCAAACCC CTTTGCCTTA GCGGGTCTGT GGACCATTGC TTTTCTGCTG
CTGCTCACCC TCTTTGGGCC CATGATTGCC CCTTTCTCCC CCGAGGCGCA GGATCCACGG
GCCTTACTGT TACCGCCCTC TTGGGACCCT TCGGGCACAG TGGCGCACTT TTTGGGCACA
GACGATCTGG GCCGAGACAT CTTTAGCCGC TTATTGCATG GTGCGCATTT AACCTTCGGC
ATGGCGCTGA TGATTGTCGG TACCGCATTG TTTATGGGGT TCATCATCGG CTCGCTATCC
GGCATGATGC GTGGCTTAAA ATCCAGTATT TTAGGTCACT TACTCGATGC ATTACTGTCA
ATCCCTTCGC TGCTGATGGC GATTTTAGTG GTCGCCGTTA TGGGGCCAGG GCTCGATAAC
GTCTTTTGGG CCGTGGGCAT TGCCTTAACG CCGCAGTTTG TGCGCTCGAT TCATCAATCG
GTGCATGAAG AGTTACAAAA AGAATACGTG ACTGCCGCCC GTTTAGACGG TGCCAATTCG
CTGCAGATTT TTTGGTATGT GATCATGCCA AACGTCTGGG AAGTGGTGAT TATTCAGACC
ACGTTAGCCA TTTCGGCCGC GATTTTAGAT ATTGCCGCCC TTGGTTTTTT AAGCCTTGGC
GCCCAAGCTC CGAGCCCTGA ATGGGGTGCA ATGGTTGCCC AAGGCATGGA TAATTTATTG
ACCGCACCTT GGACTGTGAC CATCCCAGGG CTTGCGATTC TTTTTAGTGT GCTCGCTATT
AACTTGGTGG GCGATGGCTT GAGATCGGCG CTTGCGCCCA TCAGAAACTA A
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| Protein sequence | MPPIKIYQED QIASPMMRVW QNFSANPFAL AGLWTIAFLL LLTLFGPMIA PFSPEAQDPR
ALLLPPSWDP SGTVAHFLGT DDLGRDIFSR LLHGAHLTFG MALMIVGTAL FMGFIIGSLS
GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLDN VFWAVGIALT PQFVRSIHQS
VHEELQKEYV TAARLDGANS LQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG
AQAPSPEWGA MVAQGMDNLL TAPWTVTIPG LAILFSVLAI NLVGDGLRSA LAPIRN
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