| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2553 |
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| Symbol | |
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| ID | 4257452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3014056 |
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| End bp | 3015087 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638123228 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_738595 |
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| Protein GI | 114048045 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4168] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.526476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0743978 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAT ACCTGTTTCG GCGCCTCAAT CTGTTTCTTG CCACCTCAGT GGTGATGGTC
GGCGTGTTGT TTTATGCAAC TGGGTTATTT CCCGTTGAAC GCACCTTTGC TCTCACTGGG
ATCCATGCCC CCTCGGCTAG TCAACTGGTA CAAATTGAGC AGGACTATAA GTTAGATAGC
AATCAGGCGA TGCAATTCAT TGCCTATTTA CAGCAAAGAC TGAGTGGCAA TTTAGGTCTA
TCCGTTACCT CGCACCAGAG TGTGGCTGAA GAGTTAAGCT CGGTTCTACC CGCCTCCTTC
GAACTTGCCG TAATGGCGGC GGTAATAGCC ATTGGTTTAG GTGTGCCGCT TGGCGTGTTG
GCCTCCCAGA GCCAACATAA ACTCACCCAA AATACCATTA TGGCGATTAC CCTGACGGGA
TATTCTGTGC CCGTGTTCTG GCTAGGTTTG TATTTGTCAC TCTGGTTTGG TGTCGACTTA
GGCTGGCTGC CAATTTCAGG ACAACTCAAT CTTTTATATG AGATAAAACC CGTTACGGGA
TTTATGTTGG TCGACATTTT GCTGTCTGAT TCGGAATATC GCATATCGGC CTTTAAAGAT
GCCATATTGC ATATCGTGCT GCCTGCCACC ACACTCGCAG TGCTACCTTT TACCGTGGTC
GTACGCAGCA CTCGCTCGGC AATGATGAAT GTGATGAACC AAACCTTTAT CCGCGCCGCC
GAAGCCAGAG GCATGCACAC AAACACCATT ATTTTGCGCC ACGCCTTACC CAACGCGCTG
ATCCCAGTAT TAAAGCACTT AGGATTAATG CTCGGAGCAT TTGCGAGCTA TGCGATTGTT
GTTGAAATGA TTTTCTCTTG GCCGGGTGTA GGTTCTTGGT TGGTGTCGGG TATTTATCAG
CGGGATTATA CGGTTATCCA AGGCGGGATT TTAGCCGTGG CCTTGTTGAT CATCTTTTTA
AGTATTTTGA TTGAAGTGCT GCATACCGTC TTCAATCCCT TGAGCAGAAA AGATCTTTAT
GCCTCCAATT AA
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| Protein sequence | MFRYLFRRLN LFLATSVVMV GVLFYATGLF PVERTFALTG IHAPSASQLV QIEQDYKLDS
NQAMQFIAYL QQRLSGNLGL SVTSHQSVAE ELSSVLPASF ELAVMAAVIA IGLGVPLGVL
ASQSQHKLTQ NTIMAITLTG YSVPVFWLGL YLSLWFGVDL GWLPISGQLN LLYEIKPVTG
FMLVDILLSD SEYRISAFKD AILHIVLPAT TLAVLPFTVV VRSTRSAMMN VMNQTFIRAA
EARGMHTNTI ILRHALPNAL IPVLKHLGLM LGAFASYAIV VEMIFSWPGV GSWLVSGIYQ
RDYTVIQGGI LAVALLIIFL SILIEVLHTV FNPLSRKDLY ASN
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