| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2545 |
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| Symbol | |
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| ID | 4257444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3005519 |
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| End bp | 3006712 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638123220 |
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| Product | methionine gamma-lyase |
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| Protein accession | YP_738587 |
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| Protein GI | 114048037 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.229973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0274745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATG AATCAAGCAA GATGTGGAAA GCCGCAACCC AAGCCATTCA TGCCGGACAT
GAGCGCGAAG CCTTTGGTAC TTTGGTGACG CCACTTTATC AAACGGCGAC CTTTGTCTTT
GAGTCGGCGC AGCAAGGTGG TGAGCGATTC GCTGGCAACG AACCCGGTTA CATTTATACT
CGCCTAGGTA ACCCGACAGT TGCCGAGCTG GAACGTAAAA TGGCGATTTT AGAAGGGGCA
GAAGCGGCGG CGGCAACGGC TTCTGGTATG GGGGCCGTGT CGGCGGCGCT GCTGGCTAAC
CTGCAGATGG GCGATCATTT AGTGGCTTCC AATGCGGTTT ATGGTTGCAC CTTTGCCCTT
ATGACCAGCC AATTTGCCCG CTTCGGTATC GAAGTCACCT TAGTCGATTT TACCGATTTA
GCGGCCATTG AGCGGGCCAT CAAACCCAAT ACTCGGGTGA TTTTTTGCGA AACTCCGGTA
AATCCTCATC TACAGGTGTT TGATCTTAAA GATATCGCCG ATATTGCGAA ACGGCATCAG
CTTGTCAGCA TTGTCGATAA TACTTTTATG ACGCCGCTGC TGCAGCAACC CTTGGCATTC
GGTATCGATT TAGTGGTACA CAGTGCGACT AAGTATTTGA ATGGACACGG CGATGTAATT
GCCGGCGTCG TGTGTGGCAG TGAAGAGCAG CTGCACAGAG TGAAATATGA AATCCTAAAA
GATATCGGCG CCGTCATGTC TCCCCACGAT GCTTGGTTGA TTTTACGCGG GCTGAAAACC
TTAGATGTGC GCTTGCAGCG CCATTGTGAC AGTGCCCAGC GTGTCGCCGA GTTTTTGGAG
CAACATCCTG CTGTGACTCG GGTGTATTAT CCTGGGCTTG AGTCTCACTC AGGATATCGA
TACATCGGAG GTCAGATGAA GCGCGCCGGA GGTGTGATAG CCTTTGAATT AGCCGCCGAT
CTAGCCCAGG CGATGGCATT TGTTGGTTAT CTTAAGCTGT TTTCAATCGC CGTAAGCTTG
GGGGATGCGG AATCCCTTAT TCAGCACCCA GCTTCCATGA CCCATTCGCC CTACACGCCA
GAGGCGCGTC AGGCCGCAGG GATAAGTGAT AATTTACTGC GGATCTCAAT CGGTTTAGAG
GATTGTGACG ATATCATCGA GGATTTAAGC CAAGCTTTGG CAATGCTCAC TTAA
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| Protein sequence | MQDESSKMWK AATQAIHAGH EREAFGTLVT PLYQTATFVF ESAQQGGERF AGNEPGYIYT
RLGNPTVAEL ERKMAILEGA EAAAATASGM GAVSAALLAN LQMGDHLVAS NAVYGCTFAL
MTSQFARFGI EVTLVDFTDL AAIERAIKPN TRVIFCETPV NPHLQVFDLK DIADIAKRHQ
LVSIVDNTFM TPLLQQPLAF GIDLVVHSAT KYLNGHGDVI AGVVCGSEEQ LHRVKYEILK
DIGAVMSPHD AWLILRGLKT LDVRLQRHCD SAQRVAEFLE QHPAVTRVYY PGLESHSGYR
YIGGQMKRAG GVIAFELAAD LAQAMAFVGY LKLFSIAVSL GDAESLIQHP ASMTHSPYTP
EARQAAGISD NLLRISIGLE DCDDIIEDLS QALAMLT
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