Gene Shewmr7_2534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2534 
Symbol 
ID4257415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2990597 
End bp2991379 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content42% 
IMG OID638123209 
Producthypothetical protein 
Protein accessionYP_738576 
Protein GI114048026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000115095 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000244011 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCCAAGG TAAGCAATAG AACAAAAATC GCTACTGCAC TTGTTGGCGT GCTGGCATTA 
GCGAGCAGCA ACTTAGTAGT TGCAGATCCT CTTACCGACG TGCAAAAAGC GGATAGTATG
ATCCATGCTG ATGCTGCTGC GTCGCAAAAG AATGTTGATA AGTATTTCGA TCAAGCACAA
GACATGCTCT TTGAGTATGG TTCAGTTGCT GACGAGCGTG AATCACTGAA GTCATATAAC
GATTACGTTG CCAGCTTAGT TGCTGATCAA CAAAAAACAA TGGACGCGAT TCAAAATGAC
ATTAACGGTG TAGATAAACT ACGTCAGGGC GTTGTGCCTT TAATGTTTAA AATGGTTGAG
TCTTTAGAAC AGTTCGTTCA ATTAGATTTA CCATTCAACT CTGAAGTTCG TGCTAACCGC
GTTAAAGAGT TAAAAACACT GTTAAACACA GCTGAAGTGA CTTTGGCTGA AAAATACCGT
TTGATCCTGG ATGCATACAG CATCGAGCGT GAATACGGTA GTGCTGTTGC AGTTAACCAA
GGTAAATTGA CCTTAGATGG TAAAGAAGTA TTAGTAGACT TTTTTAACTT AGGTCGTGTT
GCTTTATACG CACAGAGCTT AGATCAAAAG ACTGGCTGGA TGTACAACTC TCAAACTAAG
GCTTGGGATA AGTTAGATGA CAGCTACTTG CGTGAACTGA CAAAAGGTAT CCGCATTGCC
CGTAAACAAG GCGCTCTAGA TCTATTCGCG TTACCAATTC CTGCTGCGGA GACTGCACAA
TAA
 
Protein sequence
MSKVSNRTKI ATALVGVLAL ASSNLVVADP LTDVQKADSM IHADAAASQK NVDKYFDQAQ 
DMLFEYGSVA DERESLKSYN DYVASLVADQ QKTMDAIQND INGVDKLRQG VVPLMFKMVE
SLEQFVQLDL PFNSEVRANR VKELKTLLNT AEVTLAEKYR LILDAYSIER EYGSAVAVNQ
GKLTLDGKEV LVDFFNLGRV ALYAQSLDQK TGWMYNSQTK AWDKLDDSYL RELTKGIRIA
RKQGALDLFA LPIPAAETAQ