| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2533 |
|---|
| Symbol | |
|---|
| ID | 4257414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 2989242 |
|---|
| End bp | 2990597 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638123208 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_738575 |
|---|
| Protein GI | 114048025 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0106655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000291193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TAATTACTAC AGCTGTATTA GCTGCAAGTT TTTCTTTAAC TGCTGGTATG
GTTAGCGCTG CTGATGCGCC TAAGACCATC GATCAATTAT TGCAGCAAGT TAAAGTTGAT
CGCGCTGCTG AAGGCAAAGT TAACAGCAAA CGTGAACAAG AGTTCCAAGC TGAGCGTGGC
GATAAAGCGG CTCTGTTAAA GCGTGAAAAA GATGCTTTAG CGGCTGAGAA GCAACGCGGT
AAAGACTTAA ACCAAGCTTT CTTAGATAAC GAGCGTAAAA TTGCTCAGTT AGAAGAAGAC
CTGAAAACTG CTCAAGGTGA CTTGGGTGAG ATGTTCGGTG TGGTTAAAGG TGAAGCGGGC
GATTTCGCTG GTAAGTTAGC GAGCTCAAAC GTAAGTGCTC AATACCCAAA TCGCGATAAG
TTCATCGCTG ATTTAGGTGC GCGTAAGCAA TTACCAAAAA TCGAAGAGTT AGAGCAATTC
TGGCAAGAAC AATTATTCGA AATGGTACAA TCTGGTAAGG TTGTTAAATT CGAAGGTTCT
GTAACGGGTA TCGACGGTAG CGTTAAAAAC ACGACTATTC ATCGTATCGG TACATACAAC
TTAACTGCAG ATGGCAAATA TGTTGTATAC AACCCTGAAT TAGGTTTAAT CCAGGAGTTA
TCACAACAGC CTGAAGGCTA CCAAGTGAGT GCAGTAGGTA AGTGGGAACA AACTACTTCA
GGTACTGCGC CATTCTATAT CGACCCAGCT CGTGGCGTTC TGCTGAACAT CTTCACTAAC
AAAGCAAGCT TTGAAGATCG TTTAGAAGCG GGTGGCACAA TCGGTTACAT CATTATCGCT
CTGTTAGCAT TAGGTCTGTT GATCTCTATC GAACGTTTAG TGACTATGAC TATCATTGGC
GCTCGTGTGA ACAGCCAACG TAAGAACATT GATAACCCAG GTAACAACGC CTTAGGCCGT
ATCCTGAAAG TGTATCAAGA GAACAAAGAC GTTGACGTTG AAACATTAGA ACTGAAACTT
GACGAAGCGA TTCTGAAAGA AACGCCTGCG TTAGAGTCTC GCATTTCAAT CATCAAAGTT
CTGGCAGCTA TCGCACCTAT GATGGGTCTG TTAGGTACAG TAACAGGTAT GATTGCAACC
TTCCAAAGTA TCCAATTATT CGGTACTGGC GATCCAAAAC TGATGGCTGG CGGTATTTCT
ATGGCGCTTA TCACAACAGT TCAAGGTCTG GTTGCGGCTC TGCCTCTGAT GTTAATGCAC
GCAATTGTTG TTGCTCGTAG CAAGTCAATT GTACAAGTTC TGGAAGAGCA AAGTGCTGGT
ATCATCGCAG CGCACGCTGA GAAGAGGGCA GACTAA
|
|---|
| Protein sequence | MKKLITTAVL AASFSLTAGM VSAADAPKTI DQLLQQVKVD RAAEGKVNSK REQEFQAERG
DKAALLKREK DALAAEKQRG KDLNQAFLDN ERKIAQLEED LKTAQGDLGE MFGVVKGEAG
DFAGKLASSN VSAQYPNRDK FIADLGARKQ LPKIEELEQF WQEQLFEMVQ SGKVVKFEGS
VTGIDGSVKN TTIHRIGTYN LTADGKYVVY NPELGLIQEL SQQPEGYQVS AVGKWEQTTS
GTAPFYIDPA RGVLLNIFTN KASFEDRLEA GGTIGYIIIA LLALGLLISI ERLVTMTIIG
ARVNSQRKNI DNPGNNALGR ILKVYQENKD VDVETLELKL DEAILKETPA LESRISIIKV
LAAIAPMMGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALITTVQGL VAALPLMLMH
AIVVARSKSI VQVLEEQSAG IIAAHAEKRA D
|
|---|
| |