Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2519 |
Symbol | |
ID | 4257595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2975763 |
End bp | 2978819 |
Gene Length | 3057 bp |
Protein Length | 1018 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638123194 |
Product | SMC domain-containing protein |
Protein accession | YP_738561 |
Protein GI | 114048011 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC [TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00280637 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000395857 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAGCCAC TCTCGCTGTC TATGTCGGCC TTTGGTCCTT TTGCTTCGAG TCAAACCATT GATTTTACCG AACTGGGGAA TAACCCCTTA TTCCTGATCA ACGGGCCAAC AGGCGCGGGC AAAACCACGC TGCTCGACGG AATTTGTTTT GCGCTCTATG GAAAAACCAC GGGTAACGAG CGTGAAGGCA GCCAGATGCG CTGCGATATG GCCGATGATA GCGTACTGAC TGAGGTGACC TTTCATTTCC AATTAGGCAG TACGGGTTAT CGTATTCGTC GCGTCCCCGA GCAGGAAAGA TTAAAGAAAA GCGGTGATGG CTCAACGGTA CAAAAGAGTG AGGCGCAGCT GTATAAGATT GCCCCGGATG GCAGTGAAAC CCTTATCGTC GCCAGTAAAG TGTCAGACGC CACGGCCGAA ATTGAGGCAT TAACCGGCCT AGATGTGGAG CAGTTCCGCC AAGTGATGGT GCTTCCGCAG GGGAAGTTTC GCGAATTGCT GATGGCCGAC TCTAAGGCGC GTGAGCAGAT TTTTAGCCAA TTATTCCAAA CCCATATCTA TAAGCGCATC GAAGATACTC TAAAGGCTAA GGCGGCGGAT ATTCGCAATC TTGTCAAAGA GCAGCGCGCC CGCCGTGACG GTATTTTGCA AACGGCAGCA CTCACATCCG ATGATGAACT TACTGCAGAG TTGAGTCGCA TTGAACCCGA ATTCGCGGCG GCGACGGCAG CAAAAGAGCA GAGCGTTGCG GCGCATTTGG CGGCATTAAA ACAGCGTGAT AGCGCGCAGC AACTCTTTGC TGAATTTACT CGCTTACAGG AATTGCAGGC TGAGGCGCTT AGCCTTAATG AGCAGCAAGC GCAAATTGCA ACCCAAACGA CACGGCTTGA GGTGGCCAAG CAAGCACTGC GGGTAAAACC CTTATTAGAT AATGCCTTGT CGCGGGAGCA AGAAGCGAGT GTTGCAGCCG CTCAGCGCGA TAGCGCACAG TTGACGCTCG ATGCCGCTAA GCTCGCACTC TCTCATGCTG AAACTGCGGC GCAGGAAATT ATCCCCCTTG AACATAAGCT GCGTGAGGTT GAGCAGCAAA ATAGTCATCT CAGTGCGTTA GTGCCGCAGC TGGCAGAGTT TGCCAGCCTG GAACAAGCTT TAGCGCAGGC AAAAGAGATA CTGCAACACA CCAAATTGCA GGGGCAGGAG AGTAAAACTG CACTTGCCAC CTTAGTTGAA CAGCGCGGTC ATTGTGAGAA TCAACTGCCA GCCTTGCAAT CGCAAAGTGA GCAGCAACTT GCCACTGCGC AGGCGCTGCA GCAGCACCGT CATATGCTCG AGCAGTTCAA GCAGTGGCAG CAGATCTGTG CCAAAGTTGC GCATACTCAA GGGGTTCTTG AGCAGGTCGG CTTACAAGGA AAAGCGCTTA ATACCCAATA TCAAGCAGCT TCAACGGCTT ACAAGTCTTT GCAACTGAAA TGGTTTCAAG GTCAGGCAGC CATTTTAGCT AGAGAGTTAA AACCCCATGA GCCATGCCCG GTTTGTGGCA GTTCGGCCCA TCCGCATCCT GCGGTGAGTC ATGAGGATTT ACCAACGGAT CTACAATTGC AGGCGGCGCA GGATGCCGAG GCCTTGGCGC TCGATAATCT CAATAAAGCG CGGGCAGAAT ATCGCGGGCT GCAAAAGCAA TTAGAAACAC AGCAACATCA GGCGAATGAG CTGGCAACAG TCCTTGGCGA TAAGGTTGAG TTGTCACTCG AATCCCATAG CCAAACCTTA GAAAGGCTCA TGCAGCAAGC GAAGCAAGCC GATGCTGCGG CGCAAGCGCT GCAGCAGTTA CAGCAACAGA TCAAAACCTT GCAGCAGCAA GAGTCGACTT TGGCGCAGCA ACTTGAACTT GAGCGTGAGC GTTACCGTGA GCAAGAAGGC AAAGTCGAAC GGCTATCGGG TCAATTTGCG GAAAAAGCGC TGAGGATCCC AGAAGAATAC CGAACACTGG ATGTATTGAA TCAAGCGATT GCACATAACC AGCAGCAACT CGAACAGATA AAACGTCAGA TTGATGTTCT CAGAACCGCG CAGCAGCAGG CAACGGAGCA GAGTGTGGCG GCGCAAACGG CATTATCGGC GGCGATAGAG CGTTGTCATG CTACGGCAGA TCTGCAGGCG CAAGCACAGC AGACACTACT GACGGCACTG GATAACGCAG GCTTTATTGA TAGGGATGCA TTGCGCGAAG CCTTGTTAAC CGATGAGCAA ATGCAGACGC TGGCCGAGGG CATAGAAACC TATCACAGAC AGTGCGCCTT AAATCAGTCG CAACTGAGTC AGCTTACAAC CAAGTTGAGC GAGTCGACAT TACCCGATCT TGACGCCTTA GAGGCCTTGC TCACTGAGCG ACTCGCACAG CTTAAAACGG CGGAAGAGGT ATGGAGTCAA CTCAATACTC GGCTCACCCT GCTTAACAAT ACCCAAACTC AGCTTGCGAT TGTCGATCAA AAGGCCAAAT CCCTCGAGGA TGAATACGCT GTGGTTGGCA CCTTGGCCGA TGTTGCCAAT GGTAATACGG GCAACAAAAT TTCCCTGCAA CGCTTTGTGC TCAGCGTATT GCTCGACGAT GTGTTGCTTG CGGCAACGCA GAGGCTGCAT TTAATGAGTA AAGGGCGCTA CCGATTATTG CGTAAAGAGG ACAGGGCGAA GGGCAATAAG GCCTCAGGGC TAGAGCTTGA AGTCGAGGAT GCCTACACCT CTAAAGTGCG CCCGGTAGCG ACCTTAAGTG GTGGTGAGAG TTTTATGGCT GCCTTGTCGA TGGCCTTGGG CTTATCGGAT GTGGTTCAAG CTTACGCGGG CGGCATAAAA CTCGATACCT TATTTATTGA CGAAGGTTTT GGCAGCCTAG ATCAGGACTC CCTCGAACTT GCCATCCGTA CCCTCATGGA TTTGCAATCG GCGGGGAGGA TGATTGGGGT GATTTCCCAT GTTTCGGAAA TGAAAGAGCA GATAGGTACC CGAATCGACA TCTTGAAAAC CTCCCATGGG AGCGAAATCA AGGTGATTTT GCCTTAG
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Protein sequence | MKPLSLSMSA FGPFASSQTI DFTELGNNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE REGSQMRCDM ADDSVLTEVT FHFQLGSTGY RIRRVPEQER LKKSGDGSTV QKSEAQLYKI APDGSETLIV ASKVSDATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ LFQTHIYKRI EDTLKAKAAD IRNLVKEQRA RRDGILQTAA LTSDDELTAE LSRIEPEFAA ATAAKEQSVA AHLAALKQRD SAQQLFAEFT RLQELQAEAL SLNEQQAQIA TQTTRLEVAK QALRVKPLLD NALSREQEAS VAAAQRDSAQ LTLDAAKLAL SHAETAAQEI IPLEHKLREV EQQNSHLSAL VPQLAEFASL EQALAQAKEI LQHTKLQGQE SKTALATLVE QRGHCENQLP ALQSQSEQQL ATAQALQQHR HMLEQFKQWQ QICAKVAHTQ GVLEQVGLQG KALNTQYQAA STAYKSLQLK WFQGQAAILA RELKPHEPCP VCGSSAHPHP AVSHEDLPTD LQLQAAQDAE ALALDNLNKA RAEYRGLQKQ LETQQHQANE LATVLGDKVE LSLESHSQTL ERLMQQAKQA DAAAQALQQL QQQIKTLQQQ ESTLAQQLEL ERERYREQEG KVERLSGQFA EKALRIPEEY RTLDVLNQAI AHNQQQLEQI KRQIDVLRTA QQQATEQSVA AQTALSAAIE RCHATADLQA QAQQTLLTAL DNAGFIDRDA LREALLTDEQ MQTLAEGIET YHRQCALNQS QLSQLTTKLS ESTLPDLDAL EALLTERLAQ LKTAEEVWSQ LNTRLTLLNN TQTQLAIVDQ KAKSLEDEYA VVGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQIGT RIDILKTSHG SEIKVILP
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