| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2519 |
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| Symbol | |
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| ID | 4257595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2975763 |
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| End bp | 2978819 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638123194 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_738561 |
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| Protein GI | 114048011 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC
[TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00280637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000395857 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAGCCAC TCTCGCTGTC TATGTCGGCC TTTGGTCCTT TTGCTTCGAG TCAAACCATT
GATTTTACCG AACTGGGGAA TAACCCCTTA TTCCTGATCA ACGGGCCAAC AGGCGCGGGC
AAAACCACGC TGCTCGACGG AATTTGTTTT GCGCTCTATG GAAAAACCAC GGGTAACGAG
CGTGAAGGCA GCCAGATGCG CTGCGATATG GCCGATGATA GCGTACTGAC TGAGGTGACC
TTTCATTTCC AATTAGGCAG TACGGGTTAT CGTATTCGTC GCGTCCCCGA GCAGGAAAGA
TTAAAGAAAA GCGGTGATGG CTCAACGGTA CAAAAGAGTG AGGCGCAGCT GTATAAGATT
GCCCCGGATG GCAGTGAAAC CCTTATCGTC GCCAGTAAAG TGTCAGACGC CACGGCCGAA
ATTGAGGCAT TAACCGGCCT AGATGTGGAG CAGTTCCGCC AAGTGATGGT GCTTCCGCAG
GGGAAGTTTC GCGAATTGCT GATGGCCGAC TCTAAGGCGC GTGAGCAGAT TTTTAGCCAA
TTATTCCAAA CCCATATCTA TAAGCGCATC GAAGATACTC TAAAGGCTAA GGCGGCGGAT
ATTCGCAATC TTGTCAAAGA GCAGCGCGCC CGCCGTGACG GTATTTTGCA AACGGCAGCA
CTCACATCCG ATGATGAACT TACTGCAGAG TTGAGTCGCA TTGAACCCGA ATTCGCGGCG
GCGACGGCAG CAAAAGAGCA GAGCGTTGCG GCGCATTTGG CGGCATTAAA ACAGCGTGAT
AGCGCGCAGC AACTCTTTGC TGAATTTACT CGCTTACAGG AATTGCAGGC TGAGGCGCTT
AGCCTTAATG AGCAGCAAGC GCAAATTGCA ACCCAAACGA CACGGCTTGA GGTGGCCAAG
CAAGCACTGC GGGTAAAACC CTTATTAGAT AATGCCTTGT CGCGGGAGCA AGAAGCGAGT
GTTGCAGCCG CTCAGCGCGA TAGCGCACAG TTGACGCTCG ATGCCGCTAA GCTCGCACTC
TCTCATGCTG AAACTGCGGC GCAGGAAATT ATCCCCCTTG AACATAAGCT GCGTGAGGTT
GAGCAGCAAA ATAGTCATCT CAGTGCGTTA GTGCCGCAGC TGGCAGAGTT TGCCAGCCTG
GAACAAGCTT TAGCGCAGGC AAAAGAGATA CTGCAACACA CCAAATTGCA GGGGCAGGAG
AGTAAAACTG CACTTGCCAC CTTAGTTGAA CAGCGCGGTC ATTGTGAGAA TCAACTGCCA
GCCTTGCAAT CGCAAAGTGA GCAGCAACTT GCCACTGCGC AGGCGCTGCA GCAGCACCGT
CATATGCTCG AGCAGTTCAA GCAGTGGCAG CAGATCTGTG CCAAAGTTGC GCATACTCAA
GGGGTTCTTG AGCAGGTCGG CTTACAAGGA AAAGCGCTTA ATACCCAATA TCAAGCAGCT
TCAACGGCTT ACAAGTCTTT GCAACTGAAA TGGTTTCAAG GTCAGGCAGC CATTTTAGCT
AGAGAGTTAA AACCCCATGA GCCATGCCCG GTTTGTGGCA GTTCGGCCCA TCCGCATCCT
GCGGTGAGTC ATGAGGATTT ACCAACGGAT CTACAATTGC AGGCGGCGCA GGATGCCGAG
GCCTTGGCGC TCGATAATCT CAATAAAGCG CGGGCAGAAT ATCGCGGGCT GCAAAAGCAA
TTAGAAACAC AGCAACATCA GGCGAATGAG CTGGCAACAG TCCTTGGCGA TAAGGTTGAG
TTGTCACTCG AATCCCATAG CCAAACCTTA GAAAGGCTCA TGCAGCAAGC GAAGCAAGCC
GATGCTGCGG CGCAAGCGCT GCAGCAGTTA CAGCAACAGA TCAAAACCTT GCAGCAGCAA
GAGTCGACTT TGGCGCAGCA ACTTGAACTT GAGCGTGAGC GTTACCGTGA GCAAGAAGGC
AAAGTCGAAC GGCTATCGGG TCAATTTGCG GAAAAAGCGC TGAGGATCCC AGAAGAATAC
CGAACACTGG ATGTATTGAA TCAAGCGATT GCACATAACC AGCAGCAACT CGAACAGATA
AAACGTCAGA TTGATGTTCT CAGAACCGCG CAGCAGCAGG CAACGGAGCA GAGTGTGGCG
GCGCAAACGG CATTATCGGC GGCGATAGAG CGTTGTCATG CTACGGCAGA TCTGCAGGCG
CAAGCACAGC AGACACTACT GACGGCACTG GATAACGCAG GCTTTATTGA TAGGGATGCA
TTGCGCGAAG CCTTGTTAAC CGATGAGCAA ATGCAGACGC TGGCCGAGGG CATAGAAACC
TATCACAGAC AGTGCGCCTT AAATCAGTCG CAACTGAGTC AGCTTACAAC CAAGTTGAGC
GAGTCGACAT TACCCGATCT TGACGCCTTA GAGGCCTTGC TCACTGAGCG ACTCGCACAG
CTTAAAACGG CGGAAGAGGT ATGGAGTCAA CTCAATACTC GGCTCACCCT GCTTAACAAT
ACCCAAACTC AGCTTGCGAT TGTCGATCAA AAGGCCAAAT CCCTCGAGGA TGAATACGCT
GTGGTTGGCA CCTTGGCCGA TGTTGCCAAT GGTAATACGG GCAACAAAAT TTCCCTGCAA
CGCTTTGTGC TCAGCGTATT GCTCGACGAT GTGTTGCTTG CGGCAACGCA GAGGCTGCAT
TTAATGAGTA AAGGGCGCTA CCGATTATTG CGTAAAGAGG ACAGGGCGAA GGGCAATAAG
GCCTCAGGGC TAGAGCTTGA AGTCGAGGAT GCCTACACCT CTAAAGTGCG CCCGGTAGCG
ACCTTAAGTG GTGGTGAGAG TTTTATGGCT GCCTTGTCGA TGGCCTTGGG CTTATCGGAT
GTGGTTCAAG CTTACGCGGG CGGCATAAAA CTCGATACCT TATTTATTGA CGAAGGTTTT
GGCAGCCTAG ATCAGGACTC CCTCGAACTT GCCATCCGTA CCCTCATGGA TTTGCAATCG
GCGGGGAGGA TGATTGGGGT GATTTCCCAT GTTTCGGAAA TGAAAGAGCA GATAGGTACC
CGAATCGACA TCTTGAAAAC CTCCCATGGG AGCGAAATCA AGGTGATTTT GCCTTAG
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| Protein sequence | MKPLSLSMSA FGPFASSQTI DFTELGNNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE
REGSQMRCDM ADDSVLTEVT FHFQLGSTGY RIRRVPEQER LKKSGDGSTV QKSEAQLYKI
APDGSETLIV ASKVSDATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ
LFQTHIYKRI EDTLKAKAAD IRNLVKEQRA RRDGILQTAA LTSDDELTAE LSRIEPEFAA
ATAAKEQSVA AHLAALKQRD SAQQLFAEFT RLQELQAEAL SLNEQQAQIA TQTTRLEVAK
QALRVKPLLD NALSREQEAS VAAAQRDSAQ LTLDAAKLAL SHAETAAQEI IPLEHKLREV
EQQNSHLSAL VPQLAEFASL EQALAQAKEI LQHTKLQGQE SKTALATLVE QRGHCENQLP
ALQSQSEQQL ATAQALQQHR HMLEQFKQWQ QICAKVAHTQ GVLEQVGLQG KALNTQYQAA
STAYKSLQLK WFQGQAAILA RELKPHEPCP VCGSSAHPHP AVSHEDLPTD LQLQAAQDAE
ALALDNLNKA RAEYRGLQKQ LETQQHQANE LATVLGDKVE LSLESHSQTL ERLMQQAKQA
DAAAQALQQL QQQIKTLQQQ ESTLAQQLEL ERERYREQEG KVERLSGQFA EKALRIPEEY
RTLDVLNQAI AHNQQQLEQI KRQIDVLRTA QQQATEQSVA AQTALSAAIE RCHATADLQA
QAQQTLLTAL DNAGFIDRDA LREALLTDEQ MQTLAEGIET YHRQCALNQS QLSQLTTKLS
ESTLPDLDAL EALLTERLAQ LKTAEEVWSQ LNTRLTLLNN TQTQLAIVDQ KAKSLEDEYA
VVGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK
ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQIGT RIDILKTSHG SEIKVILP
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