Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2501 |
Symbol | |
ID | 4257208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2956917 |
End bp | 2958599 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123176 |
Product | signal transduction histidine kinase, LytS |
Protein accession | YP_738543 |
Protein GI | 114047993 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3275] Putative regulator of cell autolysis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.443565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0546493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTTGA TCTTGCTCCT GACCCAACAG ATGTCACTCT ATTTGGTGAT AGTGTATCTG GTCAGTAAAA CGCCACTTTT TAAACTGTTT GCCGAAACAG CACCACGCCT GCCCCACAAG GTGTTTATTT ATCTCATCTT TTCAAGCTTT TGCATCATGG CGACCTATTT TGGTGAGCAA ACCTCGGGTG CCATTGCCAA TACTCGCGCC ATGGGCGCCG TGTTAGGTGG CTTACTCGGT GGCCCTGTCA CTGGATTATT GGTTGGACTC ACGGGAGGTT TACACCGCTA CAGCATGGGC GGCTTTACCG ATGTAGCTTG CGCCATCTCC ACTACTCTTG AGGGGTTCTC AGCGGGAATG ATCAGCTTTT ATCTGCGCCG CGCGGGTAAG AGCGAGCTTA TCTACAATCC ACTCTTAGTC TGTCTCGTAA CTTTCTACGC CGAAATGATG CAGATGAGCA TCATTTTGCT GATTGCTCGC CCCTTCGATG ATGCCTGGGA GTTAGTACGG CAGATTGCGC CGCCGATGCT CTTGGTTAAC TCCATAGGTG CAGCACTGTT TATGAGCATG ATCCGTGATC AAAAAACCAT GTTCGATAAG CTCTCCTCCA CCTTCTCCAC CAAGGCGCTA AAAATTGCCG AGCGCAGTGT TGGCTTACTC TCTAAGGGTT TTAACGAAGA AAGCAGCGGT AAGGTCGCAC AAATTGTGAT TGAAGAAACC AATGTCGGCG CAGTAGCCAT TACCGACCGC GAAAAACTCT TAGCCTTTAT TGGCATTGGC GCAGACCATC ATATTCCCGG CACGCCAATT TCCTCAAAAA TTACCCTTGA AGCCATCAAC CAGAACAAAG TGATGTTTGC CGATGGGGTA GAGATGCCCT ACTCCTGCTC GATTTCGAGC CAGTGTAAGC TCGGTTCGAG CCTTGTGATC CCACTTCGCA GCGACACCGA AGTCATAGGC ACCATCAAGT TATACGAGCC TAAAAATAAA CTGTTCTTGA ACATTAACCG CACCTTAGGG GAAGGTATTG CACGGCTATT ATCGAACCAA ATTCTGTATG GCCGCTTTGA ACAGCAGCAA AATCTACTGA CCCAAGCCGA ACTCAAATTG CTGCAAGCTC AAGTGAATCC CCATTTTTTA TTCAACGCAC TCAATACCAT CAGTGCGATT ATTAAGCGCG ATCCCGATAT GTCGAAGCAA CTGTTGCAAC AGTTGTCGCA GTTTTTGCGG ATCAATTTAA AACGTACCAC AGGTTTAGTG ACTCTCGGGG ATGAGCTTGA TCACATCGCC TCCTATCTCA CCATTGAGAA AGCCAGATTT ATTGATAAAT TACAGGTAAA CATTGCTATC CCTGAGTCAC TCTATCACTG CAAAGTACCC GCATTTACCC TGCAACCTAT CATTGAGAAC GCCGTCAAAC ACGGTACCTC CCATATGATT GACCAAGGGC AAATCAAGGT GACAGGCCGG ATGGATGAAC AGGTATTGGT CTTAGACGTC ACTGATAATG CGGGGCTTTA CCAACCCATT ATTGGCTCTG AAGGGCTAGG CATGAATTTA GTCCATAAAC GGATCCAAAA CCTGTTTGGC GAGCAATATG GCATTCAGGT GGAATGCCAG CCGGATGAGT ACACCAAAGT TACCATCCGC TTACCCATAG AACATACGGA AACTAGCACG TGA
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Protein sequence | MSLILLLTQQ MSLYLVIVYL VSKTPLFKLF AETAPRLPHK VFIYLIFSSF CIMATYFGEQ TSGAIANTRA MGAVLGGLLG GPVTGLLVGL TGGLHRYSMG GFTDVACAIS TTLEGFSAGM ISFYLRRAGK SELIYNPLLV CLVTFYAEMM QMSIILLIAR PFDDAWELVR QIAPPMLLVN SIGAALFMSM IRDQKTMFDK LSSTFSTKAL KIAERSVGLL SKGFNEESSG KVAQIVIEET NVGAVAITDR EKLLAFIGIG ADHHIPGTPI SSKITLEAIN QNKVMFADGV EMPYSCSISS QCKLGSSLVI PLRSDTEVIG TIKLYEPKNK LFLNINRTLG EGIARLLSNQ ILYGRFEQQQ NLLTQAELKL LQAQVNPHFL FNALNTISAI IKRDPDMSKQ LLQQLSQFLR INLKRTTGLV TLGDELDHIA SYLTIEKARF IDKLQVNIAI PESLYHCKVP AFTLQPIIEN AVKHGTSHMI DQGQIKVTGR MDEQVLVLDV TDNAGLYQPI IGSEGLGMNL VHKRIQNLFG EQYGIQVECQ PDEYTKVTIR LPIEHTETST
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