| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2454 |
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| Symbol | |
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| ID | 4256165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2905223 |
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| End bp | 2905969 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123129 |
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| Product | UMP phosphatase |
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| Protein accession | YP_738496 |
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| Protein GI | 114047946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.010587 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0654899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAATA TTATCTGCGA TATCGATGGT GTACTCCTGC ACGACAATAA GCTGATCCCC
GGCAGTGATA AATTTATCCA CCGCGTTCTC GACCAAGGCA ATCCCCTCGT TATTCTGACC
AATTACCCGG TACAAACGGG CAAAGATCTG CAAAACCGCC TCAGCGCCGC CGGGATAGAC
GTACCAGAAG AATGTTTTTA CACCTCGGCC ATGGCCACCG CCGACTTTTT AAAGCATCAG
GAAGGCAGTA AAGCCTTTGT GATTGGTGAA GGCGCGCTCA CCCATGAGCT CTACAAGGCT
GGTTTTACCA TTACTGACAT TAATCCCGAC TTCGTGATTG TGGGTGAAAC CCGCTCCTAT
AACTGGGATA TGATCCATAA GGCCGCCGGA TTCGTCGCCC GCGGTGCCCG TTTTATTGCC
ACCAATCCCG ACACTCACGG CCCAGCTTAC AGTCCAGCCT GCGGCGCCCT GTGTTCACCG
ATAGAGCGGA TTACTGGCAA AAAACCTTTC TACGTCGGTA AACCCAGTTC GTGGATTATC
CGCTCGGCGC TCAACCATAT TGACGGTCAT TCAGAAAATA CCGTGATTAT TGGTGACAAT
ATGCGCACCG ATATTCTTGC GGGGTTTCAA GCGGGGCTTG AGACCATTCT GGTTACCAGC
GGCGTAAGTA AGCTTGAAGA TATCGATAAA GAGCCTTTCC GCCCCAATCA TGTATTCGCC
TGCGCTGGCG ATATTGATGT AGTTTAG
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| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDKFIHRVL DQGNPLVILT NYPVQTGKDL QNRLSAAGID
VPEECFYTSA MATADFLKHQ EGSKAFVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWDMIHKAAG FVARGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSSWII
RSALNHIDGH SENTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA
CAGDIDVV
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