| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2451 |
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| Symbol | upp |
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| ID | 4255777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2902450 |
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| End bp | 2903076 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123126 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_738493 |
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| Protein GI | 114047943 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00571838 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.261644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG TCGAGGTTAA ACACCCGTTA GTGCGTCACA AAATCGGCCT GATGCGTGAA
GGTGACATTA GCACTAAACG TTTCCGTGAG CTAGCCGCCG AAGTGGGCAG CTTGTTAACC
TATGAAGCTA CCGCAGATTT CGAAACCGAA ACTGTTACGA TTGAAGGCTG GAATGGTCCA
GTGGATGTGG ATCAGATCAA GGGCAAGAAA GTGACTGTTG TGCCTATCCT GCGTGCAGGT
TTAGGCATGA TGGATGGCGT ACTTGAGCAT ATTCCAAGTG CGCGTATTTC GGTTGTTGGT
ATTTACCGCG ACGAAGAAAC CTTAGAGCCA GTGCCATATT TTGAGAAGCT GGCGAGCGAC
ATGAACGAGC GTATCGCGCT GATCGTTGAC CCTATGCTGG CAACCGGCGG CTCTATGATT
GCGACTATCG ATTTGCTGAA AAAACGCGGT TGTACGTCGA TTAAAGCCTT AGTGTTAGTC
GCAGCGCCTG AAGGGATTAA AGCCCTTGAA GCGGCTCACC CTGATGTTGA GCTGTATACT
GCGGCTATCG ACAGATGCTT AAACGAGAAG GGTTACATTC TGCCTGGTTT AGGTGATGCA
GGTGATAAGA TTTTTGGGAC TAAATAA
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| Protein sequence | MKVVEVKHPL VRHKIGLMRE GDISTKRFRE LAAEVGSLLT YEATADFETE TVTIEGWNGP
VDVDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFEKLASD
MNERIALIVD PMLATGGSMI ATIDLLKKRG CTSIKALVLV AAPEGIKALE AAHPDVELYT
AAIDRCLNEK GYILPGLGDA GDKIFGTK
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