| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2424 |
|---|
| Symbol | |
|---|
| ID | 4257499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2868527 |
|---|
| End bp | 2869237 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123092 |
|---|
| Product | peptidase E |
|---|
| Protein accession | YP_738466 |
|---|
| Protein GI | 114047916 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3340] Peptidase E |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000847626 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000944855 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTCA ATGCCCTACT GCTTAGCAGT TCACGCGTCG GTGATACGCC TTACCTTTCC
CATGCGATTC CCTTTATCAA ACCGCTCACC ACTAACGCCC AAAAATGGAT TTTTATTCCC
TATGCCGGTG TCAGCATGAG TTACGACACT TATTTAGCCT CAGTCGTAGC GGGATTAAGT
GAACTTAGGC TCGATATCAG CGGCATTCAC CAGCATCCCG ATCCGCGCCA AGCGATTAAA
GATGCCGATG GCATTTTGAT CGGTGGTGGT AACACCTTTC ATTTATTGCA CGAGCTCTAT
AAGTATGATT TAGTGCATCT TATTCGTGAA GAAGTGATGA ATGGCAAGCC TTATATTGGC
TGGAGCGCAG GCTCTAACGT CTCGGGACTG AGCATTCGCA CCACCAACGA TATGCCGATT
ATCGAGCCAC CTTCGTTTAC CGCGCTAAAT ATTGTGCCGT TTCAGTTAAA TCCACATTAT
TCAAACTACC GCGCACCGGG ACATAACGGC GAAACCCGCG CCCAGCGCTT ACTCGAATTC
ACTCGCGTCG ATCCTATCAC CCCAGTTGTG GGTATTGTCG AGGGCAGCGC ACTCTGGCGT
CAGGGTGAAA CCTTATCCCT ACTCGGTGAC AATCCGGCCT ATTTATTCTG TGGTGAGCAG
CAAGAAATCC CCATCCCTGT GGGCAGCGAT TTATCCCATT TACTGAAATA A
|
|---|
| Protein sequence | MTVNALLLSS SRVGDTPYLS HAIPFIKPLT TNAQKWIFIP YAGVSMSYDT YLASVVAGLS
ELRLDISGIH QHPDPRQAIK DADGILIGGG NTFHLLHELY KYDLVHLIRE EVMNGKPYIG
WSAGSNVSGL SIRTTNDMPI IEPPSFTALN IVPFQLNPHY SNYRAPGHNG ETRAQRLLEF
TRVDPITPVV GIVEGSALWR QGETLSLLGD NPAYLFCGEQ QEIPIPVGSD LSHLLK
|
|---|
| |