Gene Shewmr7_2422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2422 
Symbol 
ID4257497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2865305 
End bp2867239 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content53% 
IMG OID638123090 
Producthypothetical protein 
Protein accessionYP_738464 
Protein GI114047914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000907075 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000210671 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGTCGAT TAAGTATTAT CGCGGCGGCC GTCGCGCTCA GTGCCTGTGG CGGCGGTGGT 
GGAGATAATA ATGATGGTGG TACAGTCACC CCTCCACCTA CCACTAACGT GCCACGCTGC
GCCACTGTCA CTCCGCTAGT GACCACGGAC TCAGGCGCTA TCCGCTTTAA AACTGAGCCT
CAATATGTGG CGGGACAATC CAGTGCCATT ATTGCCAGCC TAGGGAATCG CGATTCACAG
GATCTCACCT TCCGCTGGCA ACAGTTAGAA GGCCCCAGCA TTGAACTCGT GAGTCAAAAT
AGCCCTGTAT TAGCCTTTGA TATCCCCGCA GCAGGCAGCT ACCGTTTTAG CCTACATATC
AACGGCAGCA ATATCGATGA AACGGGCGAA ATAGCTATCA ATGCCGACAA CAGCGCGGGG
GCAATGCTAA ACATTCGTCA GGATCATCAA GCCGTTGAAG GTAACGATGT CAGCCTACGC
ATCGCTCAAC AAGCCGGCCT TAGTGCATCT AGCATCAATT GGTGTATCGC CGAGGGCCCC
AGTGTCAGTC TCGATATCAG CGACCCCTTT AGACCCCTAT TTACTGCGGC CACTGTTGCT
CAAGATACCT TAACTCGCCT TAGGGCATCG GCCACGATTA ACGGTAATAC AGTGACAGAT
GAAGCCTATG TGCTCACCAC GGCGGCGCCC GCTATAGACC CCAAGAGCTA CTTCGATACG
CCAGTGGCAC GCACCCACGC TTATCATCCC GCTTCTCCCT ATGCCAGCGC CTTAACGAGC
TGTGTGTACT CAAATCAGTT AAAAGAAGCC TGTACTATCA ATCAATTGCC GCTTATCGGC
CAAGTCTCAA ATATGCTCGA TGTCGACACT ATTCTCGATC GCGTATTAGT GTCCCACGAT
TGGATGGGAG ACAATTTCGC CGCATTCTTA CGTCAGATGG ACCCAAACAG CGATTTTGCC
CGCCTACTAC AATCGGTCAC CGCCGTGGTG ATAAGCTATG ATGTGCGCCC CTCGTTTTAT
TGGGTGGTCA CGGGAGCGAT TTATCTTGAC CCGAATGATT TGTGGCTCAC GCCAACCCAG
CGCGACACCA TTAACGAGGC GCCAGATTAT CGCAGCGACT TTGGCAGTGA ACTCAATTTC
ATCATGCCGT GGCGTTACGT TAAAAATAAC CAATATGCTT CACAGGGATT CCCAATCACT
ACGCGCGCCA CGCGCACGCT CAGCCAGATT AATCCCGATC TCGCCTCACT CTTGTACCAT
GAGCTCGCCC ATGCCAATGA CTTCTTCCCA AGAAGCATAC ACGCCACGCT CACAGGTCCC
AGATTGTTGG ACGACTATAG CCGTAGAAAT GCCAATAAGA GTTTGATATC CGATCAAGTG
AGTCGCAGCT ATCCCCTCAC CAGCACCGAG ATGACAGGTC TTGCGGCGGT GAGCTTCTTA
GGCGCCAAAG CCACTGCAAC TCAAAAAGCC TATCAGCCTT CGGATGTGAG TACGTTTTTC
TCCGGTGATA TCGCCAATGA CTTTTACAAC TATTCCAGTA CCCGTGAAGA CGCGGCGATG
TTATTCGAAG AAGCCATGAT GAGTTATCGC TATCAAATCC AGCGCGATGT GGCCGTCACT
AATCTGCCCG CCGTGATCAC GGCAGATACT GTGATTGTTG ACTGGGGACA AAGGGGCCGA
ATTGGCGATG ATAGTCTGGC GAACCGCGCA GCCTTGGTGA TCGATGGCAT GCTACCAGAG
CTTGATGGTA TCAGCCTGCT CACGAGCCTG CCCGAGCCAA TAGCGATGAC CCAAGGCCAA
AGCTGGCGCC AAACCCTGGG GATTTCGCCC AATACCACAG TGAAAGGACT ACAAGGGGTT
GCGGCAAGTA GCGAAACGTT TATCGAGCCA GAGCTCCGTT TCAGTGGCGA TCGTCACCGC
CATCCACAGC AATAA
 
Protein sequence
MRRLSIIAAA VALSACGGGG GDNNDGGTVT PPPTTNVPRC ATVTPLVTTD SGAIRFKTEP 
QYVAGQSSAI IASLGNRDSQ DLTFRWQQLE GPSIELVSQN SPVLAFDIPA AGSYRFSLHI
NGSNIDETGE IAINADNSAG AMLNIRQDHQ AVEGNDVSLR IAQQAGLSAS SINWCIAEGP
SVSLDISDPF RPLFTAATVA QDTLTRLRAS ATINGNTVTD EAYVLTTAAP AIDPKSYFDT
PVARTHAYHP ASPYASALTS CVYSNQLKEA CTINQLPLIG QVSNMLDVDT ILDRVLVSHD
WMGDNFAAFL RQMDPNSDFA RLLQSVTAVV ISYDVRPSFY WVVTGAIYLD PNDLWLTPTQ
RDTINEAPDY RSDFGSELNF IMPWRYVKNN QYASQGFPIT TRATRTLSQI NPDLASLLYH
ELAHANDFFP RSIHATLTGP RLLDDYSRRN ANKSLISDQV SRSYPLTSTE MTGLAAVSFL
GAKATATQKA YQPSDVSTFF SGDIANDFYN YSSTREDAAM LFEEAMMSYR YQIQRDVAVT
NLPAVITADT VIVDWGQRGR IGDDSLANRA ALVIDGMLPE LDGISLLTSL PEPIAMTQGQ
SWRQTLGISP NTTVKGLQGV AASSETFIEP ELRFSGDRHR HPQQ