Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2422 |
Symbol | |
ID | 4257497 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2865305 |
End bp | 2867239 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638123090 |
Product | hypothetical protein |
Protein accession | YP_738464 |
Protein GI | 114047914 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000907075 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000210671 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGTCGAT TAAGTATTAT CGCGGCGGCC GTCGCGCTCA GTGCCTGTGG CGGCGGTGGT GGAGATAATA ATGATGGTGG TACAGTCACC CCTCCACCTA CCACTAACGT GCCACGCTGC GCCACTGTCA CTCCGCTAGT GACCACGGAC TCAGGCGCTA TCCGCTTTAA AACTGAGCCT CAATATGTGG CGGGACAATC CAGTGCCATT ATTGCCAGCC TAGGGAATCG CGATTCACAG GATCTCACCT TCCGCTGGCA ACAGTTAGAA GGCCCCAGCA TTGAACTCGT GAGTCAAAAT AGCCCTGTAT TAGCCTTTGA TATCCCCGCA GCAGGCAGCT ACCGTTTTAG CCTACATATC AACGGCAGCA ATATCGATGA AACGGGCGAA ATAGCTATCA ATGCCGACAA CAGCGCGGGG GCAATGCTAA ACATTCGTCA GGATCATCAA GCCGTTGAAG GTAACGATGT CAGCCTACGC ATCGCTCAAC AAGCCGGCCT TAGTGCATCT AGCATCAATT GGTGTATCGC CGAGGGCCCC AGTGTCAGTC TCGATATCAG CGACCCCTTT AGACCCCTAT TTACTGCGGC CACTGTTGCT CAAGATACCT TAACTCGCCT TAGGGCATCG GCCACGATTA ACGGTAATAC AGTGACAGAT GAAGCCTATG TGCTCACCAC GGCGGCGCCC GCTATAGACC CCAAGAGCTA CTTCGATACG CCAGTGGCAC GCACCCACGC TTATCATCCC GCTTCTCCCT ATGCCAGCGC CTTAACGAGC TGTGTGTACT CAAATCAGTT AAAAGAAGCC TGTACTATCA ATCAATTGCC GCTTATCGGC CAAGTCTCAA ATATGCTCGA TGTCGACACT ATTCTCGATC GCGTATTAGT GTCCCACGAT TGGATGGGAG ACAATTTCGC CGCATTCTTA CGTCAGATGG ACCCAAACAG CGATTTTGCC CGCCTACTAC AATCGGTCAC CGCCGTGGTG ATAAGCTATG ATGTGCGCCC CTCGTTTTAT TGGGTGGTCA CGGGAGCGAT TTATCTTGAC CCGAATGATT TGTGGCTCAC GCCAACCCAG CGCGACACCA TTAACGAGGC GCCAGATTAT CGCAGCGACT TTGGCAGTGA ACTCAATTTC ATCATGCCGT GGCGTTACGT TAAAAATAAC CAATATGCTT CACAGGGATT CCCAATCACT ACGCGCGCCA CGCGCACGCT CAGCCAGATT AATCCCGATC TCGCCTCACT CTTGTACCAT GAGCTCGCCC ATGCCAATGA CTTCTTCCCA AGAAGCATAC ACGCCACGCT CACAGGTCCC AGATTGTTGG ACGACTATAG CCGTAGAAAT GCCAATAAGA GTTTGATATC CGATCAAGTG AGTCGCAGCT ATCCCCTCAC CAGCACCGAG ATGACAGGTC TTGCGGCGGT GAGCTTCTTA GGCGCCAAAG CCACTGCAAC TCAAAAAGCC TATCAGCCTT CGGATGTGAG TACGTTTTTC TCCGGTGATA TCGCCAATGA CTTTTACAAC TATTCCAGTA CCCGTGAAGA CGCGGCGATG TTATTCGAAG AAGCCATGAT GAGTTATCGC TATCAAATCC AGCGCGATGT GGCCGTCACT AATCTGCCCG CCGTGATCAC GGCAGATACT GTGATTGTTG ACTGGGGACA AAGGGGCCGA ATTGGCGATG ATAGTCTGGC GAACCGCGCA GCCTTGGTGA TCGATGGCAT GCTACCAGAG CTTGATGGTA TCAGCCTGCT CACGAGCCTG CCCGAGCCAA TAGCGATGAC CCAAGGCCAA AGCTGGCGCC AAACCCTGGG GATTTCGCCC AATACCACAG TGAAAGGACT ACAAGGGGTT GCGGCAAGTA GCGAAACGTT TATCGAGCCA GAGCTCCGTT TCAGTGGCGA TCGTCACCGC CATCCACAGC AATAA
|
Protein sequence | MRRLSIIAAA VALSACGGGG GDNNDGGTVT PPPTTNVPRC ATVTPLVTTD SGAIRFKTEP QYVAGQSSAI IASLGNRDSQ DLTFRWQQLE GPSIELVSQN SPVLAFDIPA AGSYRFSLHI NGSNIDETGE IAINADNSAG AMLNIRQDHQ AVEGNDVSLR IAQQAGLSAS SINWCIAEGP SVSLDISDPF RPLFTAATVA QDTLTRLRAS ATINGNTVTD EAYVLTTAAP AIDPKSYFDT PVARTHAYHP ASPYASALTS CVYSNQLKEA CTINQLPLIG QVSNMLDVDT ILDRVLVSHD WMGDNFAAFL RQMDPNSDFA RLLQSVTAVV ISYDVRPSFY WVVTGAIYLD PNDLWLTPTQ RDTINEAPDY RSDFGSELNF IMPWRYVKNN QYASQGFPIT TRATRTLSQI NPDLASLLYH ELAHANDFFP RSIHATLTGP RLLDDYSRRN ANKSLISDQV SRSYPLTSTE MTGLAAVSFL GAKATATQKA YQPSDVSTFF SGDIANDFYN YSSTREDAAM LFEEAMMSYR YQIQRDVAVT NLPAVITADT VIVDWGQRGR IGDDSLANRA ALVIDGMLPE LDGISLLTSL PEPIAMTQGQ SWRQTLGISP NTTVKGLQGV AASSETFIEP ELRFSGDRHR HPQQ
|
| |