Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2417 |
Symbol | |
ID | 4257350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2860831 |
End bp | 2861931 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123085 |
Product | hypothetical protein |
Protein accession | YP_738459 |
Protein GI | 114047909 |
COG category | [R] General function prediction only |
COG ID | [COG0628] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.798484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00111788 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTTAGTT TTTTCTCTCG ATGGTATCAA GAGCGCTTTA GCGATCCACA GGCGGTGACG TTGCTCGCTA TTCTGGTGGG TTTAGGCCTA ATGCTGTATT TTGCCGGCGG CTTATTAGCG CCCTTGTTGG TGGCCTTGGT GCTAGCCTTT TTGCTCGAGT GGCCTGTGGC GCAAATGCTG AAATTGGGGA TTAACCGCAC GACGGGCGCT TCCTTAGTGC TAGTGCTGTT TTTAGGGATA GTCGTTTTAC TGACCTTTGG CCTTATCCCG AGCGTGTGGC GTCAAGGCGT GAGTCTGATG ACAGATTTGC CGAGTATGAT CGACAAGGGA TTACAAACTT TGCAGGGATT AGCGACCCAG TATCCGCAGT TTGTCAGTTC AGAACAGCTC AATTTAATGG TTGCCGAGCT TAAAAAACTG CTCGACACCC AGCACCTGCT CGATATTGCT AAGCAACTGA TTGGTTACTC TGCCTCCTTA TTGGTGCTGA TGGTGTACGC CATTTTAGTG CCCTTATTAG TGTTCTTCTT TCTGAAGGAT AAAGACCAGC TGATCAGTGG CAGTAAGCGT TTTTTCCCTA CTAATCGACA ATTAGCCCGC AAGGTATGGT TTGAGATGCA CCAGCAGATC TTCAACTATA TCCGCGGCAA GGTGATTGAG ATTGTGATTG TCGGAGTAGC GAGCTACATC TTCTTTGCCT TTATGGGGCT GAGATACTCC GCCTTACTCG GGGTGTTGAC CGGTTTGTCG GTGCTCATTC CCTATGTGGG CGCGACCTTA GTGACCTTGC CCATCACCTT GGTGGCCTTC TTCCAGTGGG GCTTTAGCTC CGAGTTTGGT TATCTGATGT TAGGTTACGG CATTATTCAG GCGTTAGATG GCAACGTGCT GGTGCCCATT CTGTTTTCTG ATGCGGTGGA TTTACACCCC GTCATCATCA TTGCCGCCGT GTTAGTGTTT GGTGGTTTAT GGGGAGTTTG GGGCGTGTTC TTTGCTATCC CATTGGCGTC CTTGGTGAAA GCGGTGATCA ATGCTTGGCC GAAAACCGAG ATTGAACCTG TCGCGATAAC ACAGGTGAAG GCGGACTCGG CAGAAGCCTA A
|
Protein sequence | MFSFFSRWYQ ERFSDPQAVT LLAILVGLGL MLYFAGGLLA PLLVALVLAF LLEWPVAQML KLGINRTTGA SLVLVLFLGI VVLLTFGLIP SVWRQGVSLM TDLPSMIDKG LQTLQGLATQ YPQFVSSEQL NLMVAELKKL LDTQHLLDIA KQLIGYSASL LVLMVYAILV PLLVFFFLKD KDQLISGSKR FFPTNRQLAR KVWFEMHQQI FNYIRGKVIE IVIVGVASYI FFAFMGLRYS ALLGVLTGLS VLIPYVGATL VTLPITLVAF FQWGFSSEFG YLMLGYGIIQ ALDGNVLVPI LFSDAVDLHP VIIIAAVLVF GGLWGVWGVF FAIPLASLVK AVINAWPKTE IEPVAITQVK ADSAEA
|
| |