Gene Shewmr7_2417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2417 
Symbol 
ID4257350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2860831 
End bp2861931 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID638123085 
Producthypothetical protein 
Protein accessionYP_738459 
Protein GI114047909 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.798484 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00111788 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTAGTT TTTTCTCTCG ATGGTATCAA GAGCGCTTTA GCGATCCACA GGCGGTGACG 
TTGCTCGCTA TTCTGGTGGG TTTAGGCCTA ATGCTGTATT TTGCCGGCGG CTTATTAGCG
CCCTTGTTGG TGGCCTTGGT GCTAGCCTTT TTGCTCGAGT GGCCTGTGGC GCAAATGCTG
AAATTGGGGA TTAACCGCAC GACGGGCGCT TCCTTAGTGC TAGTGCTGTT TTTAGGGATA
GTCGTTTTAC TGACCTTTGG CCTTATCCCG AGCGTGTGGC GTCAAGGCGT GAGTCTGATG
ACAGATTTGC CGAGTATGAT CGACAAGGGA TTACAAACTT TGCAGGGATT AGCGACCCAG
TATCCGCAGT TTGTCAGTTC AGAACAGCTC AATTTAATGG TTGCCGAGCT TAAAAAACTG
CTCGACACCC AGCACCTGCT CGATATTGCT AAGCAACTGA TTGGTTACTC TGCCTCCTTA
TTGGTGCTGA TGGTGTACGC CATTTTAGTG CCCTTATTAG TGTTCTTCTT TCTGAAGGAT
AAAGACCAGC TGATCAGTGG CAGTAAGCGT TTTTTCCCTA CTAATCGACA ATTAGCCCGC
AAGGTATGGT TTGAGATGCA CCAGCAGATC TTCAACTATA TCCGCGGCAA GGTGATTGAG
ATTGTGATTG TCGGAGTAGC GAGCTACATC TTCTTTGCCT TTATGGGGCT GAGATACTCC
GCCTTACTCG GGGTGTTGAC CGGTTTGTCG GTGCTCATTC CCTATGTGGG CGCGACCTTA
GTGACCTTGC CCATCACCTT GGTGGCCTTC TTCCAGTGGG GCTTTAGCTC CGAGTTTGGT
TATCTGATGT TAGGTTACGG CATTATTCAG GCGTTAGATG GCAACGTGCT GGTGCCCATT
CTGTTTTCTG ATGCGGTGGA TTTACACCCC GTCATCATCA TTGCCGCCGT GTTAGTGTTT
GGTGGTTTAT GGGGAGTTTG GGGCGTGTTC TTTGCTATCC CATTGGCGTC CTTGGTGAAA
GCGGTGATCA ATGCTTGGCC GAAAACCGAG ATTGAACCTG TCGCGATAAC ACAGGTGAAG
GCGGACTCGG CAGAAGCCTA A
 
Protein sequence
MFSFFSRWYQ ERFSDPQAVT LLAILVGLGL MLYFAGGLLA PLLVALVLAF LLEWPVAQML 
KLGINRTTGA SLVLVLFLGI VVLLTFGLIP SVWRQGVSLM TDLPSMIDKG LQTLQGLATQ
YPQFVSSEQL NLMVAELKKL LDTQHLLDIA KQLIGYSASL LVLMVYAILV PLLVFFFLKD
KDQLISGSKR FFPTNRQLAR KVWFEMHQQI FNYIRGKVIE IVIVGVASYI FFAFMGLRYS
ALLGVLTGLS VLIPYVGATL VTLPITLVAF FQWGFSSEFG YLMLGYGIIQ ALDGNVLVPI
LFSDAVDLHP VIIIAAVLVF GGLWGVWGVF FAIPLASLVK AVINAWPKTE IEPVAITQVK
ADSAEA