| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2412 |
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| Symbol | |
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| ID | 4257345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2856829 |
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| End bp | 2857713 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123080 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_738454 |
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| Protein GI | 114047904 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0470285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00564144 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATAAACG GAAGCATCGT AGCCTTAATC ACGCCAATGA ACAGTGATGG CTCAGTAGAT
TTTGCAAGTC TTGAAAGGTT AGTCGAATTC CATATTGACC AAGGCACAGA CGCCATCGTC
GCCGTGGGTA CCACAGGCGA GTCAGCGACT CTGCCAATGA ATGAGCACGT TACTGTGGTC
GCGCAAACCG TTAAGTTTGC CGCAGGCCGT ATTCCTGTGA TTGGTGGCAA TGGCGCGAAT
GCGACATCCG AAGCAATCGA ACTCACCAAG TCTTTATCTA AAGTTGGGGT TGCTGCCATG
CTTGGCGTGA CACCTTACTA CAATAAACCC ACGCCTAAGG GTTTAGTCGC ACACTATAAA
GCTGTAGCGG CAAGCACTGA TATCCCTCAA ATTCTCTATA ACGTACCAGG CCGCACCGCG
GTGGATATGA AGCCCGAAAC TGTGGCTGAG TTAGTGGGCG TGAGCAATAT CATTGGCGTA
AAAGAAGCCA CGGGCGATGT ATCACGCGTT AAGCGTTTAC GTGAGCTTTG TGGTAACGAC
TTTATGTTGT ATAGCGGCGA TGACGCAACG GCGCGGGAGT TTTTACTCCT TGGCGGTAAT
GGCGTGATTT CGGTTGCCAA CAACATAGTG CCAAAAGCCT TTAAAGCCAT GTGTGATGCA
GCACTTGCGG GCAATGCCGA ATTAGCGGCG AGCATCGATG AGCCACTGCG TGGTCTGTAT
AGCACACTAT TCTGTGAAGC GAACCCAATC CCTGTGAAGT GGGCCGCCCA CCGTATGGGT
CTTATCGAGT GTGGTCATAT TCGTTTACCT TTGACTGAAC TTTCTGAGCA ATGTCATGGT
CTGTTGTTAG ATGCAATGAC TCGCGCCCAG ATAGAGGTTA AATAA
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| Protein sequence | MINGSIVALI TPMNSDGSVD FASLERLVEF HIDQGTDAIV AVGTTGESAT LPMNEHVTVV
AQTVKFAAGR IPVIGGNGAN ATSEAIELTK SLSKVGVAAM LGVTPYYNKP TPKGLVAHYK
AVAASTDIPQ ILYNVPGRTA VDMKPETVAE LVGVSNIIGV KEATGDVSRV KRLRELCGND
FMLYSGDDAT AREFLLLGGN GVISVANNIV PKAFKAMCDA ALAGNAELAA SIDEPLRGLY
STLFCEANPI PVKWAAHRMG LIECGHIRLP LTELSEQCHG LLLDAMTRAQ IEVK
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