Gene Shewmr7_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2407 
Symbol 
ID4257341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2849725 
End bp2850408 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content46% 
IMG OID638123076 
Productnegative transcriptional regulator 
Protein accessionYP_738450 
Protein GI114047900 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.103505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGTA AGAAAAACTT TCTATCATCT AATACTCCCA ATATGACAAG GCTTGACATG 
TATATCCCTA AAAATATGGC TCTCCACGAT AAGCAAGCGA TAGCCGACTT AATTAACCAA
TTTGGTTTTG GACTGCTCAT CTCCCCTTCC TTAGAAGCGA CCCACTTACC TCTACTTTAT
GAAGCGGCCG AGGATGGGCA AGAGTATCTC TATGGTCATA TGGCAAAAGC CAATGGTCAT
TGGCAGCAGC TCGATGGTCA ACAGGTACTA GTGGTGTTCT CTGGGCCGCA TTCCTATATT
TCACCCACTT GGTACGCTAG TGGTCCTGCG GTACCCACTT GGAACTATGC TGCAGTTCAC
TGCACTGGCA GAGTCGAGAT CTTAGATGCA AGCGCAGCCG CCAAAGCCAT AGACAAATTA
ATCGAAAAAT ATGAACCTAG CCTATCGGGA AATGCAGCCA TAATGCCTGC TGAGTATGTC
GACAAACTCT CGCAGGCGAT TGTCGGCTTT CGCGTAATTG TCGATTCGAT TCAAGCGAAG
GAAAAATTAG GACAACACAG AAAGCGAGAA GACCAAATGG GTGTCTATCA CGCCTTAGCC
AATAGTGCTT CAGCCGAAAG TCGCGCCTTA GCAGAATACA TGCTTAACAG AAATCTTGGG
ACTGGGCAGA ATAAGGAAGC ATGA
 
Protein sequence
MGSKKNFLSS NTPNMTRLDM YIPKNMALHD KQAIADLINQ FGFGLLISPS LEATHLPLLY 
EAAEDGQEYL YGHMAKANGH WQQLDGQQVL VVFSGPHSYI SPTWYASGPA VPTWNYAAVH
CTGRVEILDA SAAAKAIDKL IEKYEPSLSG NAAIMPAEYV DKLSQAIVGF RVIVDSIQAK
EKLGQHRKRE DQMGVYHALA NSASAESRAL AEYMLNRNLG TGQNKEA