Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2407 |
Symbol | |
ID | 4257341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2849725 |
End bp | 2850408 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638123076 |
Product | negative transcriptional regulator |
Protein accession | YP_738450 |
Protein GI | 114047900 |
COG category | [K] Transcription |
COG ID | [COG2808] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.103505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGTA AGAAAAACTT TCTATCATCT AATACTCCCA ATATGACAAG GCTTGACATG TATATCCCTA AAAATATGGC TCTCCACGAT AAGCAAGCGA TAGCCGACTT AATTAACCAA TTTGGTTTTG GACTGCTCAT CTCCCCTTCC TTAGAAGCGA CCCACTTACC TCTACTTTAT GAAGCGGCCG AGGATGGGCA AGAGTATCTC TATGGTCATA TGGCAAAAGC CAATGGTCAT TGGCAGCAGC TCGATGGTCA ACAGGTACTA GTGGTGTTCT CTGGGCCGCA TTCCTATATT TCACCCACTT GGTACGCTAG TGGTCCTGCG GTACCCACTT GGAACTATGC TGCAGTTCAC TGCACTGGCA GAGTCGAGAT CTTAGATGCA AGCGCAGCCG CCAAAGCCAT AGACAAATTA ATCGAAAAAT ATGAACCTAG CCTATCGGGA AATGCAGCCA TAATGCCTGC TGAGTATGTC GACAAACTCT CGCAGGCGAT TGTCGGCTTT CGCGTAATTG TCGATTCGAT TCAAGCGAAG GAAAAATTAG GACAACACAG AAAGCGAGAA GACCAAATGG GTGTCTATCA CGCCTTAGCC AATAGTGCTT CAGCCGAAAG TCGCGCCTTA GCAGAATACA TGCTTAACAG AAATCTTGGG ACTGGGCAGA ATAAGGAAGC ATGA
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Protein sequence | MGSKKNFLSS NTPNMTRLDM YIPKNMALHD KQAIADLINQ FGFGLLISPS LEATHLPLLY EAAEDGQEYL YGHMAKANGH WQQLDGQQVL VVFSGPHSYI SPTWYASGPA VPTWNYAAVH CTGRVEILDA SAAAKAIDKL IEKYEPSLSG NAAIMPAEYV DKLSQAIVGF RVIVDSIQAK EKLGQHRKRE DQMGVYHALA NSASAESRAL AEYMLNRNLG TGQNKEA
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