Gene Shewmr7_2403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2403 
Symbol 
ID4257337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2846424 
End bp2847131 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content33% 
IMG OID638123072 
Productputative lipoprotein 
Protein accessionYP_738446 
Protein GI114047896 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.324085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.250832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TAAATTACCT ACTGATTTTT ATAGCATTTA TTCTATCAGG TTGCACAAGT 
CAACCCACTG TATATATTTA TGGAAAGTAT CTAAATAATA GCCAAAAAGA GGCTATAATA
AACACCTTCG AGAAATCGGA TAAATATCAC GTGGAGGTAA ACGATTTTGA TTTTCCGACC
GATATAACAG TAAACACTCT CCTCTACTCT TTGTTTTTAC AGAAGCCTGA ATCTATTGAC
ATCGTATCAA GCTTATCTGC CTCTGCTGGA TTTTCAATTA AGCAAAAACA AGTTTTTAAT
GTAGGAAACA ACTGGTATAC AAAGGACTCA ATAGCGTTAT TTTTGTTCCC TAAAATTCTA
GATAACGGCA TTACTTTTTT TAAGCAAGAT TTAATTAACG ATTATAAAGC ACAAAATTGT
GGTACAGCGA CTTCTCTGAA GCTTAATAAG AATGGTTCAT TCAACCTCGA ATCATTATCA
AAAAGCGGCG AAAATGTAAT TGAATCAATA GATGGCATTT GGAAGTACAG GCAGTACCCA
TATTTGGAAT TGCAAACAAA AGATTCACCA TATTCGGACT ATTACTTTGA AATAAAACGC
TTTAAAGGTG CAGACAAGGT AAGTGAGATA GACTATTTGG AATTAGTTCC GCTGAATTCA
GGTAGTTTAC CCGAAGGCTG TTCTTTCTTA ATTGGTACGA GAAAATAA
 
Protein sequence
MKKINYLLIF IAFILSGCTS QPTVYIYGKY LNNSQKEAII NTFEKSDKYH VEVNDFDFPT 
DITVNTLLYS LFLQKPESID IVSSLSASAG FSIKQKQVFN VGNNWYTKDS IALFLFPKIL
DNGITFFKQD LINDYKAQNC GTATSLKLNK NGSFNLESLS KSGENVIESI DGIWKYRQYP
YLELQTKDSP YSDYYFEIKR FKGADKVSEI DYLELVPLNS GSLPEGCSFL IGTRK