Gene Shewmr7_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2402 
Symbol 
ID4257336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2845283 
End bp2846260 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content46% 
IMG OID638123071 
Producthypothetical protein 
Protein accessionYP_738445 
Protein GI114047895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.283143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.277541 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCC CTCGCAGAAT CCAAATCAGT CTTGAAGACA CTCCCTATTA TCACTGTTGT 
AGCCGCGTGG TGCGCCGTGC ATTTTTATGT GGCGATGATG CCTATTCGGG GAAAAACTAT
GACCATCGCA GAGCTTGGGT TGAGTCATTA TTATTTGAAC TTGCAGCGGT TTTTGCTATT
GATGTAGCTG CTTATGCAGT GATGTCCAAT CATCTGCATC TGGTGTTACG GGTCGATATT
GACAGTGCCA ATCGCTGGAC TGACCGTGAA GTACTTGAGC AGTGGCATAA GTTGTTTAAA
GGCGATGAAT TTACGCAAAA ATTCGTTAAA GGTGAGTTAG TTGAAGCGCA TGAGGTGAGC
AGATTAAAGC ATTCCATCGC TCTTTATCGC AGTCGATTAT GTGATATTTC ATGGTTTATG
CGCTGCCTCA ACGAACCGAT AGCAAGGCAA GCAAATCAAG AAGATAATTG CACTGGCAGG
TTCTGGGAAG GTCGGTTTAA ATCGCAGGCC TTACTGGATG AAGCTGCGGT ATTAGCCTGT
ATGACTTATG TGGATTTAAA TCCTATCAGA GCCCAACTGG CTGATACGCC AGAACAATCC
GACCATACCA GCATTCAGCT ACGTATTCGG GCTGCATTAA AAGGTGAGCA GCCTAGCAAT
CTCCTGCCTT TTATTGGCAA CGAGCACGAT AACCAACCCA ATGGCATTGC GTTTTCCTTA
ACAGATTACC TCGAATTGGT GGGTGATACG GGCCGAATTA TTCGTAATGA TAAACGTGGA
TACATCAGTG AAAATAGCTC CAAGATACTG ACAAGATTAA ATATCCCCCA TGACAATTGG
CTCAAACTGA CCACCGAGTT TGGCAAGCTA TTTCATGGTC CGGTGGGCAC GCTGCAAGAG
CTGACCGACT ACTGCGAACA TCTTGAAAAG CGACGACGGC ACTTTGCGGC AAGCTGTCAG
CACTTTAACA GTAACTGA
 
Protein sequence
MPRPRRIQIS LEDTPYYHCC SRVVRRAFLC GDDAYSGKNY DHRRAWVESL LFELAAVFAI 
DVAAYAVMSN HLHLVLRVDI DSANRWTDRE VLEQWHKLFK GDEFTQKFVK GELVEAHEVS
RLKHSIALYR SRLCDISWFM RCLNEPIARQ ANQEDNCTGR FWEGRFKSQA LLDEAAVLAC
MTYVDLNPIR AQLADTPEQS DHTSIQLRIR AALKGEQPSN LLPFIGNEHD NQPNGIAFSL
TDYLELVGDT GRIIRNDKRG YISENSSKIL TRLNIPHDNW LKLTTEFGKL FHGPVGTLQE
LTDYCEHLEK RRRHFAASCQ HFNSN