Gene Shewmr7_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2396 
Symbol 
ID4256021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2837915 
End bp2838775 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content52% 
IMG OID638123065 
Productmethylglutaconyl-CoA hydratase 
Protein accessionYP_738439 
Protein GI114047889 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.866183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAA TAATAATGAC TGACACACAA CACCAGAACA CTAGCACTCA ATCCTTAGCT 
CATTTGCAGC ACGTCAGCTA CGCGCTGAAT AACGGCGTAG GCGAGTTAAT CCTTAATCGA
GCAGAAGTGC ACAACGCCTT CGATGAGGTG ATGATCAGCG AAATGATCGC CGTCCTCGGT
TATTTTGCCG AGCACAAAGA CTGCAAACTG CTGGTATTAA AAGCCAATGG CAAAAACTTC
AGCGCAGGCG CCGACTTAAA CTGGATGCGC AAACAAGCCA AGATGGATTT TGATCAAAAC
CTGAATGACG CCAAGGCGCT GGCCAAGCTG ATGCAGGATT TAGATACCTT TCCTAAACCC
ACTATCGCCT TAGTCCAAGG GGCAGCCTTT GGCGGCGCGC TTGGGTTAAT CTGCGCCAGT
GATATTGCCA TCGCCACCGA GCGCGCAAGC TTCTGCTTAA GCGAAGTCAA ACTAGGGCTG
ATCCCTGCGG TGATTAGCCC CTACGTTGCC CGGGCCATGG GTAATCGCGC CTCACGCCGC
TATATGCTGA CCGCGGAGCG TTTTGATGCG CAAACGGCGC TCAAACTCAA TGTTATCCAT
GAGATAAACG ACGATTTAGC GGCCGCAGCA AAGCCCATTA TCACCGCGCT GCTCGCCAAC
AGTCCGCAGG GAATGGCATG GGTAAAGACC CTACTCGCCC GCCTCGAAGA CGGCGTGATA
GACCAAGATA CGATTGATTA CACCAGCGAG CGCATCGCCC GCATTCGGGT ATCTGATGAA
GGCCAAGAAG GTTTAAACGC CTTTTTTGAG AAACGTCAGC CGAACTGGCA CACGCCAACA
GATACTCAAG GAGTTCTTTG A
 
Protein sequence
MTGIIMTDTQ HQNTSTQSLA HLQHVSYALN NGVGELILNR AEVHNAFDEV MISEMIAVLG 
YFAEHKDCKL LVLKANGKNF SAGADLNWMR KQAKMDFDQN LNDAKALAKL MQDLDTFPKP
TIALVQGAAF GGALGLICAS DIAIATERAS FCLSEVKLGL IPAVISPYVA RAMGNRASRR
YMLTAERFDA QTALKLNVIH EINDDLAAAA KPIITALLAN SPQGMAWVKT LLARLEDGVI
DQDTIDYTSE RIARIRVSDE GQEGLNAFFE KRQPNWHTPT DTQGVL