Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2383 |
Symbol | |
ID | 4256009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2823684 |
End bp | 2824211 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638123053 |
Product | hypothetical protein |
Protein accession | YP_738427 |
Protein GI | 114047877 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTAA ATCCAGATTT TTTTCCGCTG ACTCAAATGG CGCAGCGATT TGTCGATCAG CTCGCCCAGT GCCGTCGCTT AGGGTTAACC GTGCTCGAGG CCAGTGAGCA CCATGTACTG ATTGAGTTGC CCTATAGCAC TGAGTTAATT GGTTATCCCG ATACTGGCGT TATCCACGGC GGGGTGATCA CCACCCTGAT GGACACCGCC TGTGGCAGTG CGGTGGTGAG TGCGATTTTT CAAAAATATC AATCCTTAGA GATTTCGCCC ACCCTCGACT TACGGGTCGA TTATATGAAG CCCGCGCAGC CCCATAAGCC GGTGTATGGT TTTGCGGAAT GCTATAAGTT GTCATCTAAT ATCGCCTTTA CCCGCGCCAT CGCCTATCAG GACAGCATCG ATGATCCTAT CGCCCATGCG GTGGGCTCTT TTATGCGTAT CAGCCCTGAA ATGGTGGGTG ATGCCTTTAG ACAAGCCTTG ATGGGAGAAG CTGTGCCGCC CTTAGGAGAG ACAGATGAAC TCAAATAA
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Protein sequence | MKVNPDFFPL TQMAQRFVDQ LAQCRRLGLT VLEASEHHVL IELPYSTELI GYPDTGVIHG GVITTLMDTA CGSAVVSAIF QKYQSLEISP TLDLRVDYMK PAQPHKPVYG FAECYKLSSN IAFTRAIAYQ DSIDDPIAHA VGSFMRISPE MVGDAFRQAL MGEAVPPLGE TDELK
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