Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2382 |
Symbol | |
ID | 4256008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2823233 |
End bp | 2823697 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638123052 |
Product | thioesterase superfamily protein |
Protein accession | YP_738426 |
Protein GI | 114047876 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAA ATAAGCCGAC CGAGCAGAAA ACCCTCGATG TGCAGGGAAT TGTAAAACGC GCCACCGAGC TGAATGACTT TGGTCATCTG CTTGAACACG TGCCCTATGC TAAGTTTATT GGCATGAAGG TCGAGCGCTT TGGCGACGAG CTGATTTTCA AACTCCCCGC TAAGGATGAC AATATCGGTA ATCCCATCCT GCCCGCGATT CATGGTGGGG TGATTGCTGG CTTTATGGAA ATGTCAGCCA TAGTGCAGTT AATGGTGTTT ATGCAAACGG CAAAAGTGCC AAAAGTCGTT GATTTTTCGA TTGATTACCT GCGTGCAGGC CTGCATAAAG ACAGCTTTGC CGAATGCCGT ATCACCCGTC AGGGGCGACG GGTCGCCAAC GTGAATATCA ATTGTTGGCA AACCAATCGT AAACAGTTGA TCGCAACCGC AAGGGCGCAC TTTTTAATCG ATTAG
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Protein sequence | MNSNKPTEQK TLDVQGIVKR ATELNDFGHL LEHVPYAKFI GMKVERFGDE LIFKLPAKDD NIGNPILPAI HGGVIAGFME MSAIVQLMVF MQTAKVPKVV DFSIDYLRAG LHKDSFAECR ITRQGRRVAN VNINCWQTNR KQLIATARAH FLID
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