Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2367 |
Symbol | |
ID | 4256747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2804596 |
End bp | 2805219 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638123037 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_738411 |
Protein GI | 114047861 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.01403 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.272564 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGATT TTGCCTTACT CGCTGTGTTT ATCCCGACCT TTTTCTTTGT TTCTATCACC CCGGGGATGT GTATGACACT TGCCATGACG CTTGGGATGA GCATTGGTGT GCGCCGTACC CTGTGGATGA TGCTCGGTGA GCTTGTTGGG GTTGCCTTGG TCGCTACCGC TGCGGTCATG GGGGTGGCGA GTATCATGCT TAACTACCCT GAGGTTTTTC AGGTATTTAA ATGGGTTGGT GGCATTTACT TAGGCTATAT CGGCGTGCAG ATGTGGCGCG CTCGAGGCAA GATGGCGATG CTCAGCGATG ATGACACTAA TCCAAGAGCC AGTAACTTTA CGCTGATTTC ACAGGGGTTT ATTACCGCCA TTGCTAACCC TAAAGGTTGG GCGTTTATGG TCTCACTATT ACCGCCATTT ATTAATGCCG AGCGCGAGGT TGCGCCGCAG CTCCTAGCCC TCCTTAGCAT TATTATGGTG ACAGAATTTA CTTCTATGTT GGCCTACGCC AGTGGCGGTA AGAGTCTGAG AATATTTTTA AGTCGCGGCG ATAACATTCG TTGGCTAAAT CGTATCGCCG GCAGCCTTAT GATTGGCGTT GGCATCTGGT TAGCGGTGAG CTAG
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Protein sequence | MPDFALLAVF IPTFFFVSIT PGMCMTLAMT LGMSIGVRRT LWMMLGELVG VALVATAAVM GVASIMLNYP EVFQVFKWVG GIYLGYIGVQ MWRARGKMAM LSDDDTNPRA SNFTLISQGF ITAIANPKGW AFMVSLLPPF INAEREVAPQ LLALLSIIMV TEFTSMLAYA SGGKSLRIFL SRGDNIRWLN RIAGSLMIGV GIWLAVS
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